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coderefinery
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reproducible-research
Reproducible research - Preparing code to be usable by you and others in the future
https://coderefinery.github.io/reproducible-research/
Creative Commons Attribution 4.0 International
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example on how to build singularity container
#263
eglerean
closed
4 months ago
0
extendended the time-capsule example
#262
eglerean
closed
4 months ago
0
Check snakemake episode webpage
#261
samumantha
opened
4 months ago
0
Instructor guide updates missing for March 24 updates
#260
samumantha
opened
4 months ago
0
Updates for March 24 workshop
#259
samumantha
closed
4 months ago
2
Create CR reproducible project template?
#258
samumantha
opened
4 months ago
0
Small updates to snakemake lesson
#257
samumantha
closed
4 months ago
0
Link to "Recommendations for the packaging and containerizing of bioinformatics software"
#256
bast
opened
8 months ago
0
remove two images which moved to Social coding lesson
#255
bast
closed
10 months ago
0
Motivation pyramid image citation
#254
samumantha
closed
10 months ago
3
Links, Intro and where to go from here
#253
samumantha
closed
10 months ago
8
Add carpentries links to environments lesson as further reading
#252
samumantha
closed
10 months ago
0
mark optional exercises for sep 23 workshop
#251
samumantha
closed
10 months ago
0
Moved "sharing" to social coding and reordered according to schedule
#250
samumantha
closed
10 months ago
6
Add new planned schedule
#249
samumantha
closed
10 months ago
1
Please verify list of exercises
#248
bast
closed
10 months ago
3
Lessons learned from container workshop at RSEcon 2023
#246
bast
opened
10 months ago
0
Add CITATION.cff
#245
samumantha
opened
10 months ago
1
Extended title suggestion
#244
samumantha
closed
10 months ago
3
Link to https://epcced.github.io/2023-09-06-rse-singularity/
#243
bast
closed
10 months ago
1
Add CR overview in beginning of lesson (issue renamed)
#241
samumantha
closed
10 months ago
4
Add citation.cff
#240
samumantha
opened
11 months ago
2
Full lesson summary
#239
samumantha
closed
10 months ago
1
Try to give more practical focus
#237
bast
opened
1 year ago
0
Update detailed schedule in instructor notes
#236
bast
closed
10 months ago
21
Mention somewhere "Building reproducible analytical pipelines with R"
#235
bast
closed
10 months ago
0
citation for Code Refinery?
#234
EstherPlomp
opened
1 year ago
1
Add python version; fix #232
#233
gregordecristoforo
closed
1 year ago
1
`environment.yml` files should include python version
#232
gregordecristoforo
closed
1 year ago
0
content/environments: mobile kitchens are factory-built food trucks
#231
rkdarst
closed
1 year ago
1
content/dependencies: Use group-tabs for the languages
#230
rkdarst
closed
1 year ago
1
Update instructor guide
#229
bast
closed
1 year ago
0
Mention other popular workflow tools
#228
bast
closed
1 year ago
0
Add word count explanation image
#227
bast
closed
1 year ago
0
Mention https://ds-wizard.org/
#226
bast
closed
1 year ago
0
Mention snakemake --lint
#225
bast
closed
1 year ago
0
Add solutions to exercises
#224
bast
closed
1 year ago
0
Fix rendering issues in "organizing projects"
#223
bast
closed
1 year ago
0
Organising projects -episode
#222
MatiasJJ
closed
1 year ago
1
Add H. Seibolds's overview figure of how to do reproducible software
#221
bast
closed
1 year ago
0
Check whether we still need make-alternative.md
#220
bast
closed
1 year ago
0
Recording computational steps
#219
bast
closed
1 year ago
1
Exploring conda environments
#218
bast
closed
1 year ago
0
Organizing your projects
#217
bast
closed
1 year ago
0
Motivation
#216
bast
closed
1 year ago
1
Added ML xkcd + Docker meme +
#215
MatiasJJ
closed
1 year ago
2
Moved exercise preparation, solves #212
#214
MatiasJJ
closed
1 year ago
2
Good resource about containers from CSC
#213
bast
opened
1 year ago
4
Move Exercise preparation to just before the exercise
#212
MatiasJJ
closed
1 year ago
0
Lift learning outcomes from instructor guide to index page
#211
bast
closed
1 year ago
0
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