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comprna
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SUPPA
SUPPA: Fast quantification of splicing and differential splicing
MIT License
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ERROR:psiCalculator:PSI not calculated for event
#201
maronem
opened
1 week ago
3
Can't find inclusion_transcripts in ioe file
#200
mianlee
closed
4 days ago
1
iso_tpm error when formatting
#199
igonzalsbmc
closed
1 month ago
5
transcription of ioe or gtf
#198
XXuxi
closed
1 month ago
1
ClusterEvent problem
#197
Xing-2024
closed
1 month ago
1
diffsplice index error
#196
Amhaslam
opened
2 months ago
6
suppa version issue
#195
happypiggyzjx
closed
1 month ago
1
Error when installing statsmodels
#194
igonzalsbmc
closed
1 month ago
2
ERROR:lib.tools:1, in line 2. Skipping line... ERROR:lib.tools:49151, in line 49152. Skipping line...
#193
Bio-info-ai
opened
2 months ago
1
How to Determine Differential Variable Splicing Events (DAS)?
#192
happypiggyzjx
closed
1 month ago
1
UnboundLocalError("local variable 'i' referenced before assignment",)
#191
happypiggyzjx
closed
5 months ago
2
Issues reading transcript expression files
#190
ryanpe13002
closed
1 month ago
3
diffSplice error，a classic one: 'UnboundLocalError'. I have tried my best.
#189
gnilihzeux
closed
4 days ago
5
"Differential transcript usage", the cognate gene expression?
#188
iamhealthy
closed
1 month ago
1
Help about rank differential gene
#187
BourbonZhang
closed
8 months ago
4
Error with diffSplice
#186
Tang-pro
closed
8 months ago
4
psiPerEvent - "transcript not found"
#185
bvien24
opened
8 months ago
6
Help with generation of PSI results
#184
chandaayan
opened
9 months ago
1
missing lib.tools
#183
theokirkland
closed
1 month ago
1
Addressing Batch Effects in Datasets with SUPPA2
#182
XXuxi
opened
9 months ago
3
Feature Request: Inter-sample PSI Value Comparison for Large Datasets in SUPPA2
#181
XXuxi
opened
9 months ago
1
U12 splicing event
#180
jiehuichen
closed
1 month ago
4
diffSplice Error
#179
liuyh99
opened
10 months ago
6
generateEvents option returning empty .ioe files
#178
ArnavBharti
opened
11 months ago
5
IndexError while using generateEvents
#177
ArnavBharti
closed
11 months ago
4
about nan values
#176
fafuyyk
closed
11 months ago
1
How to analyze mas-iso-seq data using suppa ?
#175
gygys
closed
4 days ago
1
abnormal P-value from the "suppy.py diffSplice"
#174
gengbaobao
opened
1 year ago
4
GTF input file
#173
dvirdi01
closed
4 days ago
1
Ioe files not showing desired output
#172
dvirdi01
opened
1 year ago
0
Seek a help of SUPPA2
#171
imustxyq
opened
1 year ago
1
A question about calculating the adjusted p-value
#170
RacconC
opened
1 year ago
1
cryptic exon
#169
rezarahman12
closed
1 year ago
2
No replicate samples
#168
gengbaobao
closed
1 year ago
1
Clarification on Interpretation of PSI Values Approaching 1 or 0, and Determining Alternative Splicing.
#167
qingwangchen
closed
1 year ago
4
None p-value was less than 0.05 after diffSplice
#166
Renee-SU
closed
1 year ago
8
Calculate differential splicing events
#165
SSaleem94
closed
1 year ago
11
psiPerEvent problem
#164
zjanna
opened
1 year ago
1
Problems on multipleFieldSelection.py
#163
Dongmeng-wang
opened
1 year ago
0
psiperEvent not working
#162
SignorLab
opened
1 year ago
6
psiPerIsoform resulting in empty .psi file
#161
TinyTasy
opened
1 year ago
2
SUPPA not working on quantification
#160
Oliverfeudj
opened
1 year ago
10
Can diffsplice deal with condition only has one sample（no replications）
#159
QingCheZhang
closed
1 year ago
2
getting nothing in results simple identification of AS events
#158
Xtreme011
opened
1 year ago
5
PSI normalization
#157
Dongmeng-wang
closed
1 year ago
4
generateEvents missies some Retained Intron (RI) events
#156
HegedusB
opened
2 years ago
5
Multithread difftools.py
#155
tithuytrang
closed
2 years ago
0
Multithread and asynchronous
#154
tithuytrang
closed
2 years ago
0
Multithread ver
#153
tithuytrang
closed
2 years ago
0
Regarding pvalues in diffSplice
#152
heebaanjum
opened
2 years ago
1
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