cortex-lab Suite2P issues

cortex-lab / Suite2P

Tools for processing 2P recordings

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issues

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GUI adds a lot of noise instead of ROI

#193 ghattasb opened 2 months ago
0
xy shift of reference image

#192 ruitpeixoto opened 3 months ago
0
Neuropil fluorescence calculation

#191 juliadode opened 5 months ago
0
Suite2p on mac

#190 TaliVas opened 10 months ago
1
Save motion corrected tiffs

#189 simonweiler opened 1 year ago
0
Optimal tau value for GCaMP8m

#188 msoheib opened 1 year ago
1
Transposing F matrix in spike deconvolution

#187 XuanweiLi opened 1 year ago
0
multiplane_parallel in an HPC (Slum)

#186 gmaggi opened 2 years ago
1
contiguous scanning ROIs

#185 frikyng closed 2 years ago
1
combine sbx files

#184 smilingtoad opened 3 years ago
1
tau value for GCaMP8

#183 immj22 opened 3 years ago
2
deconvolution_standalone2 not standalone

#182 street-grease-coder opened 3 years ago
0
GUI error

#181 szocs93 opened 4 years ago
0
saving registered uint16 data

#180 poherron opened 4 years ago
0
Cannot set up batch processing

#179 sarahapark opened 4 years ago
0
Enquiry regarding diameter of ROI

#178 xwchia closed 4 years ago
1
Interpreting Deconvolution Results

#177 dba91 opened 4 years ago
4
Merging ROIs in suite2P matlab version

#176 suyashh94 closed 4 years ago
1
Input to Suite2P

#175 Sabermea opened 4 years ago
0
using "look_one_level_down" doesn't use "bad_frames.npy"

#174 hwpdalgleish closed 5 years ago
0
running suite2p with GUI on GPUs

#173 vickerse1 opened 5 years ago
1
Error in reg2p: array exceeds maximum array size preference

#172 ghost closed 5 years ago
0
"NameError: name 'shutil' is not defined, line 231 "shutil.copy(classorig, classfile)" in "roi_detect _and_extract(ops)

#171 vickerse1 opened 5 years ago
0
Undefined function or variable 'Fbase'.

#170 chunyueli opened 5 years ago
0
NameError: name 'ndimage' is not defined

#169 eskuebler closed 5 years ago
0
Python executable pointing to python2

#168 kvoit closed 5 years ago
1
Fixed bug in GetRandFrames...

#167 sylviaschroeder opened 5 years ago
5
bug in GetRandFrames() due to reshape()

#166 MikaDia opened 5 years ago
7
Registration and Example data

#165 elgutierr closed 5 years ago
4
new_main broken

#164 suyashh94 opened 5 years ago
1
Missing frames

#163 OmriG87 opened 5 years ago
1
Redefine channel order

#162 OmriG87 closed 5 years ago
2
compare more than two sessions with registers2p?

#161 MariangelaP opened 5 years ago
3
Align across planes

#160 sylviaschroeder closed 5 years ago
0
Correct values for ops0.sensorTau?

#159 PhantomSpike closed 5 years ago
4
Change the brightness of the mean image in GUI

#158 PhantomSpike closed 5 years ago
6
Deconvolution problems

#157 horsto opened 5 years ago
4
How to tweak ROI refinement process

#156 lachioma opened 5 years ago
3
generate target frames

#155 annie2013 closed 5 years ago
2
loading tiff files

#154 annie2013 opened 6 years ago
3
Question on Rigid vs Non-rigid Registration

#153 danachang opened 6 years ago
1
Data Format Questions on Image Registration

#152 danachang opened 6 years ago
20
Option to turn off baseline estimation and detrending?

#151 naomicxia opened 6 years ago
3
Load ScanImage File

#150 cmketchmark opened 6 years ago
6
OASISpreprocess returns baseline-subtracted calcium instead of the baseline?

#149 synapticlee opened 6 years ago
1
Error while loading proc files in registers2p

#148 suyashh94 opened 6 years ago
11
Undefined function or variable 'codes'

#147 JakeHeffley closed 6 years ago
0
Processing extracted red channel

#146 kameronclayton closed 6 years ago
1
Running more iterations for cell extraction

#145 cmketchmark closed 5 years ago
2
add dendrites/boutons detection mode

#144 marius10p opened 6 years ago
2