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cytoscape
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RCy3
New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community
MIT License
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Conflicting Brightness/Contrast defaults in addImageAnnotation documentation
#174
bdemchak
closed
2 years ago
4
Conflicting Opacity documentation
#173
bdemchak
closed
2 years ago
2
Conflicting Brightness/Contrast documentation
#172
bdemchak
closed
2 years ago
4
In addAnnotationText (and others), name check seems misplaced
#171
bdemchak
closed
2 years ago
3
How does customShape parameter work in addAnnotationBoundedText
#170
bdemchak
closed
1 year ago
7
openAppStore function opens the Cytoscape App Store 404 web page
#169
yihangx
closed
2 years ago
1
creating network through RCy3 resulting network has the right nodes and edges but edge table gets messed up with conflicting data
#168
risserlin
closed
2 years ago
6
equivalent of setNodeImageDirect
#167
rmflight
closed
2 years ago
4
creation of networks using createNetworkFromIgraph()
#166
peranti
closed
2 years ago
1
GeneMania Attributes
#165
valentinapapa
closed
2 years ago
1
setEdgeLineWidthMapping issue
#164
m-grimes
closed
2 years ago
19
commandsRun('string show enrichment') doesn't work as part of a code chunk
#163
khanspers
closed
2 years ago
1
setNodeBorderWidthMapping doesn't work as expected for setting a stepped gradient with two data points
#162
khanspers
closed
2 years ago
2
installApp() method gives a success message even if the app was not loaded
#161
khanspers
closed
2 years ago
2
addAnnotationShape customShape can only add rectangle
#160
yihangx
closed
2 years ago
2
Using latest version of RCy3 and cytoscape 3.9 still not able to load list data using LoadDataTable
#159
risserlin
closed
2 years ago
5
deleteSelectedNodes not working when you specify the base.url
#158
risserlin
closed
2 years ago
7
perform tests for release
#157
AlexanderPico
closed
2 years ago
0
update NEWS for release
#156
AlexanderPico
closed
2 years ago
0
Merge "Optimize installation time""
#155
yihangx
closed
2 years ago
0
Revert "Optimize installation time"
#154
yihangx
closed
2 years ago
0
Optimize installation time
#153
yihangx
closed
2 years ago
0
Fix comparisons in .verifySupportedVersions
#152
AlexanderPico
closed
2 years ago
0
sandboxSendTo not works for png and cys
#151
yihangx
closed
2 years ago
2
libcurl error -- SOLUTION: outdated version of R
#150
AlexanderPico
closed
2 years ago
1
Network name change due to stringApp update
#149
kozo2
closed
2 years ago
0
Add annotation functions
#148
AlexanderPico
closed
2 years ago
5
Annotation commands failing
#147
ejurga
closed
2 years ago
3
Copying commandHelp gave error
#146
DeniseSl22
closed
2 years ago
0
createVisualStyle not work in cloud
#145
yihangx
closed
2 years ago
2
createFilter not work in cloud
#144
yihangx
opened
2 years ago
2
LoadTableData should work with tibbles
#143
AlexanderPico
closed
2 years ago
0
Cytoscape Rmd notebooks broken in README
#142
wptmdoorn
closed
3 years ago
1
save, exports and imports have a regression bug
#141
AlexanderPico
closed
3 years ago
6
isolate setVisualStyle need for sleep in unit test
#140
AlexanderPico
closed
3 years ago
2
Sync node/edge_name_to_suid utility functions to include new unique_list=False parameter
#139
bdemchak
closed
1 year ago
8
Sync automatic style mapping with py4cytoscape
#138
bdemchak
closed
2 years ago
0
setVisualStyle needs sleep
#137
AlexanderPico
closed
3 years ago
0
commandsPOST() does not correctly parse arguments
#136
mikekucera
closed
2 years ago
3
getStyleMappings
#135
AlexanderPico
closed
3 years ago
0
update NEWS
#134
AlexanderPico
closed
3 years ago
0
cyrestAPI()
#133
AlexanderPico
closed
3 years ago
3
Sandbox
#132
yihangx
closed
3 years ago
0
map value generators
#131
AlexanderPico
closed
3 years ago
8
Implement deleteDuplicateEdges with ignoreDirection
#130
bdemchak
opened
3 years ago
8
Possible failure in deleteDuplicateEdges() and addCyEdges()
#129
bdemchak
closed
2 years ago
0
Incorrect return from createNetworkFromDataFrames
#128
bdemchak
closed
3 years ago
1
annotations: returned values
#127
AlexanderPico
closed
3 years ago
0
annotations: z param
#126
AlexanderPico
closed
2 years ago
0
annotations: Optional params for 'add text'
#125
AlexanderPico
closed
3 years ago
0
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