dieterich-lab / Baltica

Baltica: integrated differential junction usage
https://dieterich-lab.github.io/Baltica/
MIT License
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alternative-splicing bioinformatics bioinformatics-pipeline data-integration workflows

Baltica

Zenodo DOI
bioRxiv pre-print


Baltica: integrated splice junction usage analysis

Features

Instructions for using Baltica

We tested the instruction below in a computer cluster running Debian Linux distribution and using the Slurm job scheduler. Baltica uses Snakemake and Singularity, which support many different high-performance systems, for instructions on how to use it on different systems, please see Setting up Baltica: long edition or contact us,

Documentation

https://dieterich-lab.github.io/Baltica/.

Setting up Baltica

Instalation instructions

Contribution

Feedback and contribution are welcome. Would you mind submitting via the GitHub issue tracker Please provide the following information while submitting issue reports: