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edawson
/
gfakluge
A C++ library and utilities for manipulating the Graphical Fragment Assembly format.
http://edawson.github.io/gfakluge/
MIT License
51
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20
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Add --version option to each tool [feature request]
#22
sjackman
closed
6 years ago
10
Trim overlapping bits of contigs [feature request]
#21
sjackman
closed
6 years ago
15
Please document the command line utilities
#20
sjackman
closed
6 years ago
2
Links still not showing
#19
LukasW94
closed
6 years ago
3
Build error
#18
LukasW94
closed
6 years ago
2
Pull in bug fixes
#17
edawson
closed
6 years ago
2
N50 / L50 / N90 / L90 recipes could be faster
#16
edawson
closed
6 years ago
1
GFAKluge assumes V1.0 / 0.1
#15
edawson
closed
6 years ago
0
fasta -> GFA
#14
edawson
closed
6 years ago
1
Sequence ends aren't handled correctly when the sequence string isn't included
#13
edawson
closed
6 years ago
1
Edges don't receive IDs in the same namespace as segments
#12
edawson
opened
6 years ago
0
GFA2 + progs
#11
edawson
closed
6 years ago
0
opt_elems are not parsed for C and L lines
#10
edawson
closed
6 years ago
1
Dev
#9
edawson
closed
7 years ago
0
GFA isn't GFA
#8
edawson
closed
7 years ago
1
GFA/DAS divergence (GFAK has fallen off-spec)
#7
edawson
closed
6 years ago
2
Compilation issue with g++ 5.3.1
#6
ekg
closed
6 years ago
4
GFA extended to include JSON tags
#5
edawson
closed
8 years ago
1
Honor CXX if set
#4
adamnovak
closed
8 years ago
0
Segment labels sorted alphabetically and not by numeric value
#3
edawson
closed
8 years ago
1
gfakluge lacks sanity checking
#2
edawson
opened
8 years ago
0
gfakluge doesn't parse optional fields
#1
edawson
closed
8 years ago
1
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