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edawson
/
gfakluge
A C++ library and utilities for manipulating the Graphical Fragment Assembly format.
http://edawson.github.io/gfakluge/
MIT License
51
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20
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fatal error: gfakluge.hpp: No such file or directory
#73
uveyikk
opened
1 month ago
0
can't build
#72
8banzhuan
opened
2 years ago
1
minor typo fix
#71
aafshinfard
opened
2 years ago
0
Add sensible default for gfak ids --start-ids
#70
kdm9
closed
2 years ago
1
Read (b)gzipped GFA format files
#69
AndreaGuarracino
opened
2 years ago
0
Parse GFA from standard input when using dash as a filename
#68
cartoonist
closed
3 years ago
1
Remove broken path_elem constructor
#67
zwets
closed
3 years ago
2
Extracting regions with a degree threshold
#66
Zethson
opened
4 years ago
0
gfak::mmap_open opens O_RDWR
#65
tetron
opened
4 years ago
2
Makefile:37: *** missing separator. Stop.
#64
JuFengWang
opened
4 years ago
5
Bump streaming from main branch
#63
edawson
opened
4 years ago
0
Create ccpp.yml
#62
edawson
opened
4 years ago
0
Update tinyFA to latest submod version
#61
edawson
closed
4 years ago
0
Update submodules
#60
cartoonist
closed
4 years ago
2
Make build system more flexible
#59
mr-c
closed
4 years ago
2
Update Makefile - make install bug fixed
#58
hnikaein
closed
4 years ago
1
Remove std namespace pollution
#57
camillescott
closed
4 years ago
2
Fix return
#56
adamnovak
closed
5 years ago
0
Fix warnings
#55
cartoonist
closed
4 years ago
0
Fix target paths to be installed
#54
cartoonist
closed
4 years ago
0
Inline methods (and also memmapping I guess?)
#53
jeizenga
opened
5 years ago
0
Add inline statements
#52
jeizenga
closed
5 years ago
1
Header only library fails linking if included in >= 2 object files
#51
jeizenga
opened
5 years ago
3
Use mem map to avoid loading paths
#50
ekg
closed
5 years ago
1
Makefile (install): Run mkdir
#49
sjackman
closed
5 years ago
1
extract: Outputs blank lines
#48
sjackman
opened
5 years ago
1
Header only
#47
edawson
closed
5 years ago
0
Compact the assembly graph [feature request]
#46
sjackman
opened
5 years ago
0
[FEATURE REQUEST] Update diff to use MinHash-based sequence comparison
#45
edawson
opened
6 years ago
0
Renumber segments [feature request]
#44
sjackman
opened
6 years ago
1
[Feature request] GFAK trim - trim a graph by segment length
#43
edawson
opened
6 years ago
6
JOSS submission updates
#42
edawson
closed
6 years ago
0
Adapt to work with Apple Clang and Macports OpenMP
#41
adamnovak
closed
6 years ago
1
fillseq: segfaults when GFA does not exist, succeeds when FASTA does not exist
#40
sjackman
closed
6 years ago
2
Simplify Makefile
#39
sjackman
opened
6 years ago
2
Makefile (CXXFLAGS): Add -Wall
#38
sjackman
closed
6 years ago
3
fillseq: Output is not deterministic
#37
sjackman
closed
6 years ago
13
Tag a stable release
#36
sjackman
opened
6 years ago
4
Fix #34
#35
adamnovak
closed
6 years ago
0
path_elem orientations are backward in GFA 0.1
#34
adamnovak
closed
6 years ago
2
Build
#33
edawson
closed
6 years ago
0
gfak build command
#32
edawson
closed
6 years ago
2
fillseq
#31
edawson
closed
6 years ago
0
GFA file of only gap records segfaults
#30
sjackman
opened
6 years ago
5
Fix some low-hanging fruit
#29
asl
closed
6 years ago
2
Reduce output RAM usage / Change the way << operator works
#28
edawson
opened
6 years ago
1
Switch to faster split function
#27
edawson
closed
6 years ago
1
Missing optional element in "L" line parsing
#26
edawson
closed
6 years ago
1
Single exe+ docs
#25
edawson
closed
6 years ago
1
Homebrew / Linuxbrew package
#24
sjackman
closed
6 years ago
5
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