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fairgenomes
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fairgenomes-semantic-model
FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.
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fix case for molgenis-emx2 files
#156
puva
opened
1 month ago
0
Reference to non-existent IAO term
#155
cmungall
opened
3 months ago
0
Align with GSC MIxS
#154
cmungall
opened
3 months ago
0
Import into EMX-2
#153
aubinthomas
opened
5 months ago
1
Update img locations
#152
joerivandervelde
closed
9 months ago
0
Update resources
#151
joerivandervelde
closed
9 months ago
0
Add NGS kits
#150
joerivandervelde
closed
9 months ago
0
Added institute
#149
joerivandervelde
closed
11 months ago
0
Refinements
#148
joerivandervelde
closed
11 months ago
0
Updates for EMX2 generation
#147
joerivandervelde
closed
11 months ago
0
Updates for EMX2
#146
joerivandervelde
closed
1 year ago
0
Better ontology type for gene
#145
joerivandervelde
opened
1 year ago
0
Better disease ontology type
#144
joerivandervelde
opened
1 year ago
0
Expanded sequencing model instrument list
#143
joerivandervelde
closed
1 year ago
0
Expand sequencing model instrument list
#142
joerivandervelde
closed
1 year ago
0
Make units a lookup
#141
joerivandervelde
opened
2 years ago
0
Rework pathological state of a material
#140
joerivandervelde
opened
2 years ago
1
Improve study design
#139
joerivandervelde
opened
2 years ago
0
Fix for improve consanguinity #137
#138
joerivandervelde
closed
2 years ago
0
Improve consanguinity
#137
joerivandervelde
closed
2 years ago
0
Update version to 1.3 snapshot
#136
joerivandervelde
closed
2 years ago
0
Update LODE for 1.2 release
#135
joerivandervelde
closed
2 years ago
0
Preparing for 1.2 release
#134
joerivandervelde
closed
2 years ago
0
Updated age related elements with unit
#133
joerivandervelde
closed
2 years ago
0
Make FAIR Genomes cross-species compatible
#132
joerivandervelde
opened
2 years ago
1
Suggestion: create human-friendly schema browser
#131
joerivandervelde
opened
2 years ago
0
Added new element to report analyses other than genomics @joerivandervelde
#130
joerivandervelde
closed
2 years ago
0
Implemented ability to define relations between modules
#129
joerivandervelde
closed
2 years ago
0
Investigate using LinkML to represent FAIR Genomes schema
#128
joerivandervelde
opened
2 years ago
1
Various updates and fixes
#127
joerivandervelde
closed
2 years ago
0
Need a way to express fetal samples
#126
joerivandervelde
opened
2 years ago
0
Rename resources from RDF to XML to fix MIME type issues
#125
joerivandervelde
closed
2 years ago
0
MIME type test
#124
joerivandervelde
closed
2 years ago
0
Fixes #113
#123
joerivandervelde
closed
2 years ago
0
Fix #107
#122
joerivandervelde
closed
2 years ago
0
Fix #101
#121
joerivandervelde
closed
2 years ago
0
Fix and units
#120
joerivandervelde
closed
2 years ago
0
Use median instead of average values if possible
#119
mmokrejs
opened
2 years ago
3
Check interoperability with SPHN
#118
joerivandervelde
opened
2 years ago
0
Various updates to keep things in sync
#117
joerivandervelde
closed
2 years ago
0
Patient can have multiple ICFs and NGS analyses, but these are not linked
#116
joerivandervelde
opened
2 years ago
0
Request: add provisional phenotype attribute to clinical module?
#115
davidruvolo51
closed
2 years ago
1
Implemented parsing of SKOS terms to expand ontology mapping #108
#114
joerivandervelde
closed
2 years ago
0
allowrecontacting option "For incidental findings" description and The Internationalized Resource Identifier for this term do NOT match
#113
Fernananas
closed
2 years ago
1
Add ERNs to organisations/institutes?
#112
joerivandervelde
opened
2 years ago
2
Investigate how FDP can be connected to FAIR Genomes schema
#111
joerivandervelde
opened
2 years ago
0
Check out Alpha-ID-SE - BfArM coding
#110
joerivandervelde
opened
2 years ago
0
Term deprecation mechanism needed
#109
joerivandervelde
opened
2 years ago
0
Implement ontology alternatives i.e. mappings in the schema
#108
joerivandervelde
closed
2 years ago
2
Typo in PI
#107
joerivandervelde
closed
2 years ago
0
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