fgcz rawDiag issues - Githubissues

fgcz / rawDiag

Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package

https://bioconductor.org/packages/rawDiag

36 stars 11 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Problems with the read.raw()

#77 georgiaAngelidou opened 1 year ago
0
Package "mardown" and "plyr" have to be installed so the ShinyApp works

#76 lfnothias opened 2 years ago
0
protViz 0.6.8 required prior to install rawDiag on R.4.0.5

#75 lfnothias opened 2 years ago
0
[Extra feature that would be nice] Using m/z / RT values for QCs rather peptides

#74 lfnothias opened 2 years ago
0
I am trying to run read.raw, but it returns an error

#73 kwebber3 closed 3 years ago
1
issues with tempfile opening

#72 millerlehman opened 3 years ago
0
Error in FUN(left, right) : non-numeric argument to binary operator in `PlotCycleTime`

#71 cpanse opened 3 years ago
2
`funs()` was deprecated in dplyr 0.8.0.

#70 cpanse opened 3 years ago
0
Deprecation messages for read.XIC() and readScans()

#69 tobiasko closed 3 years ago
1
replace `warning` with `message`

#68 cpanse closed 3 years ago
0
Error in source(tfo) : negative length vectors are not allowed

#67 rcastelo closed 3 years ago
15
Installation of new RawFileReader files

#66 breidan closed 3 years ago
19
.computeBestPeptideSpectrumMatch function

#65 NicolasEsk closed 3 years ago
11
Cannot find dependency "Spectra"

#64 joerg-b closed 3 years ago
2
create unit test for `read.raw.info()`

#63 tobiasko opened 3 years ago
0
Read additional Infos from Raw Files (Status Log, Tune Method) etc.

#62 BerndMaier opened 3 years ago
10
Reading Analag Traces from RawFiles

#61 BerndMaier opened 3 years ago
7
Problems reading Meta Data from QExactive HF / HFX Instruments

#60 BerndMaier opened 3 years ago
28
R 4.0.2 - Error: `x` must be a vector, not a `data.frame/rawDiag` object.

#59 cpanse opened 3 years ago
3
plot.peaklist function does not allow to overwrite title and y- n xlabels

#58 jjGG opened 4 years ago
0
Split one plot into multiple pages

#57 3H2ORZ closed 4 years ago
6
test rawDiag release on R-4.0.0

#56 cpanse opened 4 years ago
3
read.raw output

#55 viviantra closed 4 years ago
8
overlays of different plots

#54 cpanse opened 4 years ago
0
dodge multiple chromatograms to different positions in PlotTICBasePeak as overlay

#53 cpanse opened 4 years ago
0
Add Signal to Noise data to ReadScan

#52 David-Degnan closed 4 years ago
6
implement `MsBackendRawDiag.R` for `Spectra`

#51 cpanse closed 5 years ago
19
Number of precursors scheduled for fragmentation for each MS1 scan

#50 pisistrato closed 5 years ago
1
implement a read.raw.info method

#49 cpanse closed 5 years ago
3
Error: Negative length vectors are not allowed

#48 dzolg closed 5 years ago
2
Def. origin scan type for instrument cycle

#47 tobiasko opened 5 years ago
0
call C# code from R

#46 cpanse opened 5 years ago
6
XIC mass range option for shiny application

#45 cpanse opened 5 years ago
1
ggplots for QCs

#44 cpanse opened 5 years ago
1
class raw

#43 tobiasko opened 5 years ago
0
`XICs.as.data.frame <- function(x)`

#42 cpanse opened 5 years ago
0
add scan filters to readXICs()

#41 tobiasko opened 5 years ago
3
unit test data

#40 tobiasko opened 5 years ago
1
``About rawDiag'' tab for shiny application

#39 tobiasko opened 5 years ago
3
supported std. peptides

#38 tobiasko opened 5 years ago
1
single install.R for windows/linux

#37 cpanse opened 5 years ago
2
change default path reading files

#36 cpanse opened 5 years ago
4
`plot.XIC` and `plot.XICs`

#35 cpanse opened 5 years ago
1
data analysis task: MaxQuant evidence file for targeted XIC extraction

#34 wolski opened 5 years ago
1
language setting - digits separator is a comma and not a dot

#33 cpanse opened 5 years ago
0
"try" output to console when extracting centroided ITMS scans

#32 dzolg closed 5 years ago
1
Update README.md

#31 lars20070 closed 5 years ago
0
Update README.md

#30 lars20070 closed 5 years ago
0
FUSION FTMS/ITMS und Centroided/Profile data.

#29 cpanse closed 5 years ago
2
add study and lab info to sample information

#28 cpanse opened 5 years ago
0