fmi-faim faim-ipa issues

fmi-faim / faim-ipa

A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)

BSD 3-Clause "New" or "Revised" License

9 stars 6 forks source link

issues

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Avoid endless loop in `get_git_root`

#196 imagejan closed 1 week ago
1
Make date optional when parsing imagexpress data

#195 fstur closed 1 week ago
4
[pre-commit.ci] pre-commit autoupdate

#194 pre-commit-ci[bot] opened 1 week ago
1
[pre-commit.ci] pre-commit autoupdate

#193 pre-commit-ci[bot] closed 2 weeks ago
1
[pre-commit.ci] pre-commit autoupdate

#192 pre-commit-ci[bot] closed 3 weeks ago
1
Improve eicm test coverage.

#191 tibuch opened 3 weeks ago
0
Migrate https://github.com/fmi-faim/eicm to faim-ipa.

#190 tibuch closed 3 weeks ago
2
Improve documentation

#189 imagejan opened 3 weeks ago
0
[pre-commit.ci] pre-commit autoupdate

#188 pre-commit-ci[bot] closed 3 weeks ago
1
IPAConfig: generalize reference path handling

#187 imagejan closed 1 month ago
1
[pre-commit.ci] pre-commit autoupdate

#186 pre-commit-ci[bot] closed 1 month ago
1
Iterchildren

#185 tibuch closed 1 month ago
1
[pre-commit.ci] pre-commit autoupdate

#184 pre-commit-ci[bot] closed 1 month ago
1
Improve IPAConfig

#183 imagejan closed 1 month ago
1
[pre-commit.ci] pre-commit autoupdate

#182 pre-commit-ci[bot] closed 1 month ago
1
Add detect_spots_2d.

#181 tibuch closed 2 months ago
3
2D spot detection

#180 tibuch closed 2 months ago
0
Logging with decorator

#179 tibuch closed 3 weeks ago
1
Improve stitching performance

#178 imagejan closed 2 months ago
1
Migrate conda build to recipe format v2

#177 imagejan closed 3 weeks ago
1
Create ome-zarr from hdf5 container

#176 tibuch opened 2 months ago
2
[pre-commit.ci] pre-commit autoupdate

#175 pre-commit-ci[bot] closed 2 months ago
1
[pre-commit.ci] pre-commit autoupdate

#174 pre-commit-ci[bot] closed 3 months ago
1
Plate conversion tweaks

#173 tibuch closed 3 months ago
1
[pre-commit.ci] pre-commit autoupdate

#172 pre-commit-ci[bot] closed 3 months ago
1
Add pixi utility modules

#171 imagejan closed 3 months ago
4
[pre-commit.ci] pre-commit autoupdate

#170 pre-commit-ci[bot] closed 3 months ago
1
Make create_logger code a little more concise

#169 imagejan closed 3 months ago
2
Set logger level to INFO and extend test.

#168 tibuch closed 3 months ago
1
Created logger does not log INFO level

#167 tibuch closed 3 months ago
3
Fix or ignore remaining ruff linting issues

#166 imagejan opened 3 months ago
0
Fix various code style issues

#165 imagejan closed 3 months ago
2
Integrate examples into tests

#164 imagejan opened 4 months ago
0
[pre-commit.ci] pre-commit autoupdate

#163 pre-commit-ci[bot] closed 3 months ago
1
[pre-commit.ci] pre-commit autoupdate

#162 pre-commit-ci[bot] closed 4 months ago
1
Fix scaling.

#161 tibuch closed 4 months ago
1
Blob detection finds fewer blobs

#160 tibuch closed 4 months ago
0
Rework blob detection to accept a list of scaling factors.

#159 tibuch closed 4 months ago
1
Consider hatch-conda for mobie-related tests on CI

#158 imagejan opened 4 months ago
1
Update stitching_utils

#157 fstur closed 4 months ago
4
None wavelength

#156 tibuch closed 4 months ago
2
[pre-commit.ci] pre-commit autoupdate

#155 pre-commit-ci[bot] closed 4 months ago
1
Issue in stitching.stitching_utils.fuse_linear

#154 fstur closed 4 months ago
4
CellVoyager: fix wavelength parsing

#153 imagejan closed 5 months ago
1
CellVoyager: parse wavelength from 'Acquisition' instead of 'Target'

#152 imagejan closed 5 months ago
0
[pre-commit.ci] pre-commit autoupdate

#151 pre-commit-ci[bot] closed 5 months ago
1
Add typos pre-commit hook

#150 imagejan closed 5 months ago
1
CI: upload to codecov

#149 imagejan closed 5 months ago
2
Add tests for visiview

#148 tibuch opened 5 months ago
1
Histogram computation and ome-zarr metadata

#147 imagejan opened 5 months ago
4