gaynorr AlphaSimR issues

gaynorr / AlphaSimR

R package for breeding program simulations

https://gaynorr.github.io/AlphaSimR/

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issues

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Inconsistent behaviour when merging pop and a NULL pop

#190 gregorgorjanc closed 3 hours ago
3
Exported meanEBV() and added varEBV()

#189 gregorgorjanc closed 1 week ago
0
switchTrait() introduces NA values in VarE

#188 irenedecarlos closed 3 weeks ago
2
Website: point to Owen's "mechanistic model" simulation

#179 gregorgorjanc opened 4 months ago
1
Liability-Threshold Model

#178 gaynorr opened 5 months ago
0
Provide more informative SimParam errors

#177 gregorgorjanc opened 5 months ago
0
Clarifying that newPop() doesn't recombine founder genomes

#176 gregorgorjanc closed 5 months ago
0
Import 1segSite haplo

#175 david20011999 closed 5 months ago
3
Enable passing function or misc slots to the use argument in selection functions #173

#174 gregorgorjanc closed 5 months ago
0
Enable passing function or misc slots to the use argument in selection functions

#173 gregorgorjanc closed 5 months ago
1
Sync CATTLE parameters #164

#172 gregorgorjanc closed 6 months ago
0
Sync CATTLE parameters #164

#171 gregorgorjanc closed 6 months ago
0
Consider having genParam write to popMisc

#170 gaynorr opened 6 months ago
2
Add function to create empty MultiPop

#169 gregorgorjanc opened 6 months ago
0
Flipping misc organisation to address #107

#168 gregorgorjanc closed 6 months ago
6
Added imprinting trait and functionality

#167 gregorgorjanc closed 7 months ago
8
Merge fix in restrSegSites

#166 gaynorr closed 7 months ago
0
Write vignette on how to modify runMacs() and how to use other simulators for founders

#165 gregorgorjanc opened 8 months ago
2
Sync stdpopsim & AlphaSimR runMaCS() parameters of Holstein

#164 gregorgorjanc closed 6 months ago
2
Convert Genetic Maps

#163 gaynorr opened 8 months ago
0
Doc update for miscPop

#162 gregorgorjanc closed 8 months ago
0
Devel

#161 gaynorr closed 8 months ago
0
Add popMisc

#160 gaynorr closed 8 months ago
1
Vignette for using misc

#159 gaynorr opened 8 months ago
2
Get AlphaSimR onto R universe

#158 gregorgorjanc opened 8 months ago
0
Docs on rate/scale param of the gamma distribution #156

#157 gregorgorjanc closed 9 months ago
0
Add rate parameter to gamma distribution for QTL effects

#156 gregorgorjanc closed 9 months ago
2
potential bug with writeRecords

#154 poca87 closed 8 months ago
5
More appropriate README.md

#153 gregorgorjanc closed 10 months ago
0
Rename or alias setPheno() to simPheno()

#152 gregorgorjanc opened 10 months ago
0
Faster multitrait simulations

#151 gaynorr opened 11 months ago
0
Expanding GxE Modelling

#150 gaynorr opened 11 months ago
1
Documenting user defined functions in selectInd() #146

#148 gregorgorjanc closed 11 months ago
0
Update NEWS.md

#144 philipbg closed 12 months ago
1
Multipop

#143 philipbg closed 12 months ago
5
makeCross2 and ID problem

#142 AudreyAAMartin closed 1 year ago
6
ped as vector in 'importInbredGeno' and 'importHaplo'

#141 gaynorr closed 1 year ago
1
Integrate altAddTraitAD

#140 gaynorr closed 8 months ago
0
SelectInd(): definition of eligible individuals is problematic (full simulation VS simulation+data)

#138 AudreyAAMartin closed 8 months ago
2
Check user interrupt

#137 maxecoulter closed 2 months ago
3
Flexibility to add extra slot

#134 mab658 opened 1 year ago
4
Update misc.R

#132 philipbg closed 1 year ago
2
pedigreeCross fails with half founders

#131 AudreyAAMartin opened 1 year ago
3
Fix pedigreeCross

#130 AudreyAAMartin opened 1 year ago
1
Add a bit of genomic intro to the basic vignette

#129 gregorgorjanc opened 1 year ago
0
Offer conversions from one to another genetic map

#128 gregorgorjanc opened 1 year ago
0
Think about formula interface for phenotypes

#127 gregorgorjanc opened 1 year ago
0
Implement tree sequence

#126 gregorgorjanc opened 1 year ago
4
Develop repository of Breeding program templates

#125 gregorgorjanc opened 1 year ago
0
Write vignette on how to import data

#124 gregorgorjanc opened 1 year ago
1