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glennhickey
/
progressiveCactus
Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules
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Problem starting ktserver
#37
mikolmogorov
opened
9 years ago
1
caf requesting large amounts of memory
#36
ens-bwalts
closed
9 years ago
4
no computation or error
#35
larsBM
opened
9 years ago
0
Kyototycoon / Kyotocabinet make issues
#34
jeremylp2
opened
9 years ago
0
starting troubles...
#33
GGopinath
opened
9 years ago
2
logLevel should be passed on to jobTree
#32
aaronk
opened
9 years ago
0
python script crashes and cactus goes idle.
#31
Papos92
opened
9 years ago
0
connectivity issue during installation
#30
Papos92
closed
9 years ago
0
Best parameters to detect insertions and deletions
#29
HussainAther
opened
9 years ago
5
Compiler error with GCC 4.8.1
#28
mschatz
opened
9 years ago
4
error when "make"
#27
yjx1217
closed
8 years ago
11
potential additional kentTool to add
#26
epaule
closed
9 years ago
1
Doesn't Build on GCC4.9 Unless CFLAGS=-std=c99
#25
adamnovak
opened
9 years ago
11
Install with PCRE in non-standard location?
#24
tsackton
closed
9 years ago
2
CentOS 6 build failed
#23
jpearl01
closed
9 years ago
2
Unable to aligin using runProgressiveCactus.s
#22
gopin001
closed
9 years ago
4
hal2assemblyHub.py failing to find Bio when run from progressiveCactus with "import source"
#21
benedictpaten
closed
9 years ago
9
progressive cactus doesn't support parallel make
#20
diekhans
opened
10 years ago
1
Can't build progressiveCactus on OSX (10.7.5)
#19
deannachurch
closed
10 years ago
9
about running progressivecatus
#18
leirhyh
opened
10 years ago
15
need support for BED thick start/end
#17
diekhans
opened
10 years ago
3
How to resubmit a job...
#16
vasilislenis
opened
10 years ago
0
Sequence ids are incorrectly truncated
#15
mikolmogorov
opened
10 years ago
0
.hal output with nothing aligned on near-identical single-sequence genome assemblies
#14
MarioStanke
closed
9 years ago
5
Error: At least two valid leaf genomes required in input tree
#13
vasilislenis
opened
10 years ago
2
command not found
#12
vasilislenis
opened
10 years ago
4
.maf files have same sources
#11
Mcfoofa
closed
10 years ago
20
not exporting .hal file
#10
Mcfoofa
closed
10 years ago
3
Full genome aligning
#9
Mcfoofa
closed
10 years ago
5
aligner error
#8
Mcfoofa
closed
10 years ago
2
broken os os x mavericks
#7
benedictpaten
opened
10 years ago
0
Running too long on two simulated genomes
#6
iminkin
opened
10 years ago
7
Run Errors
#5
iminkin
closed
10 years ago
3
Build troubles
#4
iminkin
closed
10 years ago
7
bin/runProgressiveCactus.sh: line 32: bin/../environment: No such file or directory
#3
dbolser
opened
10 years ago
11
Update README.md
#2
benedictpaten
closed
11 years ago
0
problems during build
#1
linsalrob
opened
11 years ago
0
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