issues
search
grimbough
/
biomaRt
R package providing query functionality to BioMart instances like Ensembl
https://bioconductor.org/packages/biomaRt/
32
stars
13
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
[Feature Request] warning instead of message if unresponsive
#56
Nelson-Gon
opened
2 years ago
0
Lock error in 4.1.1 not in 4.03
#55
ZheFrench
opened
2 years ago
3
listMarts has familiar SSL error
#54
LiNk-NY
closed
2 years ago
5
How to specify the version for Plants.ensemble ?
#53
Sherry520
opened
2 years ago
1
Proxy issue from version 2.48.0
#52
echarpentier
opened
2 years ago
0
the issue is about converting human gene list to pig
#51
labixiaoxin1234
closed
2 years ago
1
argument "httr_config" is missing, with no default in useMart() call for archival versions
#50
lambdamoses
opened
2 years ago
3
Probelm: The number of columns in the result table does not equal the number of attributes in the query
#49
ytlin610
closed
2 years ago
3
Problem with useMart specifying the host mar2016
#48
JFerrer-B
closed
2 years ago
1
Internal merge after query results in loss of information
#47
mcanouil
closed
2 years ago
4
Print genome version being queried
#46
grimbough
opened
3 years ago
0
Possibility to set cache location
#45
cruckert
closed
3 years ago
1
Possible SSL connectivity problems detected.
#44
evareisinger
opened
3 years ago
11
Question about BioMart
#43
rachel662
opened
3 years ago
0
problem installing biomaRt on Fedora
#42
guidohooiveld
closed
3 years ago
13
Moving SSL configuration away from onLoad()
#41
grimbough
closed
3 years ago
1
new_config may not exist at end of zzz.R
#40
vjcitn
closed
3 years ago
7
SSL certificate problem: unable to get local issuer certificate
#39
c-mertes
closed
3 years ago
10
Error in UseMethod("filter_") :
#38
SunnyWit
closed
3 years ago
2
biomaRt not finding all genes
#37
danielcgingerich
opened
3 years ago
0
nvm - please delete
#36
danielcgingerich
closed
3 years ago
0
Error with biomaRt_2.46.0
#35
weijiaru
opened
3 years ago
0
Refactor tests
#34
grimbough
closed
3 years ago
0
Possible bug in getSequence()
#33
gtollefson
opened
3 years ago
4
Possible bug with getSequence
#32
gtollefson
closed
3 years ago
1
SSL certificate problem: unable to get local issuer certificate
#31
kbrulois
closed
3 years ago
5
getLDS() errors in scan and 'both datasets must be located on the same host'
#30
yuewangpanda
closed
3 years ago
2
getLDS error in scan
#29
mvis1231
closed
3 years ago
0
Error: failed to load external
#28
BJWiley233
closed
3 years ago
6
R package providing query functionality to BioMart instances like Ensembl
#27
crisprmax
closed
3 years ago
2
how to force getBM to use https link instead of http
#26
vipints
closed
3 years ago
2
useMart Timeout reached
#25
rlittman16
closed
3 years ago
2
Error with getBM() - no such table : metadata
#24
Manaswwm
opened
3 years ago
8
Timeout was reached: [www.ensembl.org:80] Operation timed out after 300000 milliseconds with 0 bytes received
#23
aarbduarte
closed
3 years ago
2
The timeout=300 on the first line of .submitQueryXML is too short.
#22
abelew
closed
3 years ago
4
Error in getLDS function when applied to mmc57bl6nj_gene_ensembl database
#21
Sophia409
closed
3 years ago
1
curl timeout for simple (but large) queries
#20
mschubert
closed
4 years ago
2
Connecting to Ensembl: Internal Server Error (HTTP 500).
#19
JonatanFernandez
closed
3 years ago
2
error with getSequence
#18
SalvatoreRa
opened
5 years ago
7
Swap RCurl for curl
#17
grimbough
closed
3 years ago
2
Catching "line X did not have Y elements"
#16
grimbough
closed
3 years ago
1
Mouse to Human mapping errors
#15
komalsrathi
closed
5 years ago
1
Changing variable pb to avoid conflict with progress package (issue #13)
#14
lubianat
opened
5 years ago
1
Conflict with getBM and the progress package
#13
lubianat
closed
5 years ago
1
getBM returns logical minor_allele column when minor_allele = T
#12
sinarueeger
opened
5 years ago
2
uniqueRows argument in getBM() not working
#11
rikrdo89
closed
5 years ago
1
getBM() error: Could not resolve host: NA
#10
Gurlaz
closed
5 years ago
3
Update utilityFunctions.R
#9
manolisathan
closed
5 years ago
2
UniProt Still Mentioned
#8
DarioS
closed
5 years ago
1
hugo -> entrez incomplete
#7
smoe
opened
5 years ago
1
Previous
Next