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h3abionet
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h3agatk
MIT License
21
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14
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Convert tools from CWL draft-3 format to CWL v1.0 format
#18
mr-c
opened
3 years ago
0
convert tabs to spaces to fix CWL parsing
#17
mr-c
opened
3 years ago
0
add citation data
#16
azzaea
closed
5 years ago
0
Several tools are still in cwl:draft-3
#15
ghost
opened
5 years ago
0
bamstat step did not produce desired output even reported "completed Success"
#14
QuanliWang
opened
5 years ago
0
Gatk jar file as input
#13
hocinebendou
closed
6 years ago
1
fixing ReadGroup tag, GATK jar call in realignment stage
#12
azzaea
closed
6 years ago
0
Move doc headline to the label
#11
mr-c
opened
6 years ago
0
Workflow Summary (trimmomatic)
#10
raonyguimaraes
opened
6 years ago
0
fixing references to resources: 1kG for VQSR, dbsnp for Realignment s…
#9
azzaea
closed
6 years ago
3
Parllelizing the workflow
#8
azzaea
opened
7 years ago
0
Fastqc checking
#7
azzaea
closed
7 years ago
2
Process structure created up to Quality trimming continue
#6
AbrahamvdBerg
closed
7 years ago
0
prefer mulled containers built from bioconda
#5
pvanheus
opened
7 years ago
0
3 workflows duplicate snpeff invocation step
#4
pvanheus
opened
7 years ago
0
snpEff docker + memory fixes
#3
pvanheus
closed
7 years ago
0
bwa-mem step uses dictCreated parameter
#2
pvanheus
opened
7 years ago
0
snpeff docker image not found
#1
slagelwa
opened
7 years ago
1