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haesleinhuepf
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BioImageAnalysisNotebooks
Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more
https://haesleinhuepf.github.io/BioImageAnalysisNotebooks
BSD 3-Clause "New" or "Revised" License
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add hardware guide for bioimage analysis
#47
jackyko1991
opened
2 days ago
1
Fixed typo
#46
YitengDang
closed
1 month ago
0
Immunofluorescence data
#45
apal6
closed
5 months ago
1
OpenAI & LangChain notebooks might be outdated
#44
haesleinhuepf
closed
5 months ago
0
Issue on page layouts
#43
kephale
opened
8 months ago
0
Various suggestions from VolkerH
#42
VolkerH
opened
9 months ago
0
Issue on page /12a_image_file_formats/opening_czi_files.html
#41
tuhulab
opened
11 months ago
1
added notebook about downsampling in combination with denoising
#40
thawn
closed
11 months ago
2
add notebook demonstrating the difference between `cle.scale` and `skimage.transform.downscale_local_mean`
#39
thawn
closed
11 months ago
2
Slice shape issue on page /20_image_segmentation/Segmentation_3D.html
#38
ClementCaporal
opened
1 year ago
0
fix F1 score computation
#37
ClementCaporal
opened
1 year ago
1
Tracking notebook
#36
marabuuu
closed
1 year ago
0
Batch processing
#35
marabuuu
closed
1 year ago
0
Navbar not working on iPad in portrait mode
#34
iimog
opened
1 year ago
0
Error in importing the package
#33
Mojzaar
closed
1 year ago
2
Changed tabular data wrangling notebooks
#32
marabuuu
closed
1 year ago
2
Modified feature extraction notebooks
#31
marabuuu
closed
1 year ago
2
Fix some typos
#30
iimog
closed
1 year ago
1
Truncated content in "Computing with images" notebook
#29
iimog
closed
1 year ago
1
add Metrics to investigate segmentation quality
#28
marabuuu
closed
1 year ago
3
Questions on page /29_algorithm_validation/validate-spot-counting.html
#27
ClementCaporal
opened
1 year ago
1
Explore https://www.pola.rs/
#26
haesleinhuepf
opened
1 year ago
0
Pr 20
#25
haesleinhuepf
closed
1 year ago
0
Logic error when trying to open image with pyscleranto_prototype
#24
sebgoti
closed
1 year ago
2
Spot detection quality control example notebook
#23
Shannon-E-Taylor
closed
1 year ago
1
Issue on page /18_image_filtering/03_background_removal.html
#22
Nelson-Gon
closed
1 year ago
1
remove magic, updated viewer, fix colormap
#20
guiwitz
closed
1 year ago
1
napari and nD visualization
#19
guiwitz
closed
1 year ago
1
General questions
#18
guiwitz
opened
2 years ago
2
[WIP] Intro to image processing reorganization
#17
guiwitz
closed
1 year ago
1
Import packages
#16
guiwitz
closed
2 years ago
1
f-strings
#15
guiwitz
closed
2 years ago
0
Intro questions
#14
guiwitz
opened
2 years ago
3
How do PRs work to notebooks?
#13
psobolewskiPhD
closed
2 years ago
5
Issue on page /12_image_analysis_basics/02_Working_with_images.html - data
#12
ElisabethKugler
closed
1 year ago
2
fixed typo
#11
ElisabethKugler
closed
2 years ago
0
Fix 1 typo and 1 spacing
#10
ElisabethKugler
closed
2 years ago
0
Typos
#9
ElisabethKugler
closed
2 years ago
1
adding microfilm examples
#8
haesleinhuepf
closed
1 year ago
0
Matplotlib Image Figures
#7
tibuch
opened
2 years ago
7
Please update the dependency in reademe
#6
rayanirban
closed
2 years ago
1
contributions
#5
guiwitz
opened
2 years ago
4
statistics
#4
amgfernandes
closed
2 years ago
1
Annotate over image
#3
zoccoler
closed
2 years ago
1
explore dataset example
#2
amgfernandes
closed
2 years ago
1
separate raw and build
#1
haesleinhuepf
closed
2 years ago
0