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hammerlab
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cycledash
Variant Caller Analysis Dashboard and Data Management System
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Tasks pages have lost styling
#665
ihodes
closed
9 years ago
0
Can we surface other proven variants around a particular variant?
#664
jaclynperrone
opened
9 years ago
0
Surface the fact that you can point to a NFS mounted file
#663
jaclynperrone
opened
9 years ago
1
User should be able to know which reference genome was used in a VCF file
#662
jaclynperrone
opened
9 years ago
3
User should be able to generate VCFs using Guacamole in CycleDash
#661
jaclynperrone
opened
9 years ago
0
sass.on() is not defined in gulp-sass v2.0.1
#660
armish
closed
9 years ago
1
resolves #658
#659
armish
closed
9 years ago
8
gulp build fails due to a missing library file
#658
armish
closed
9 years ago
3
Added steps to make sure the build system behaves well
#657
armish
closed
9 years ago
5
numpy is now a requirement for convenience
#656
armish
closed
9 years ago
7
How do we know when we are successful?
#655
jaclynperrone
closed
9 years ago
7
Who are we building CycleDash for?
#654
jaclynperrone
closed
9 years ago
14
Test cycledash.views.tasks
#653
ihodes
opened
9 years ago
0
Prioritize existing issues
#652
jaclynperrone
closed
9 years ago
1
Runs page & project redesign
#651
jaclynperrone
closed
9 years ago
1
Comments redesign
#650
jaclynperrone
closed
9 years ago
9
Better error logging on deployed Cycledash
#649
ihodes
opened
9 years ago
0
Explore color schemes
#648
jaclynperrone
closed
9 years ago
1
Pileup.js + Design = fancyPileup.js
#647
jaclynperrone
closed
9 years ago
6
Which features are we interested in resurrecting?
#646
jaclynperrone
opened
9 years ago
2
Explore different karyogram orientations
#645
ryan-williams
closed
8 years ago
7
Get seltest running on Sauce Labs and TravisCI
#644
ihodes
closed
9 years ago
1
Add tests for comment and home views
#643
ihodes
closed
9 years ago
2
Run the genotype extractor tests on a bunch of different VCFs
#642
ihodes
opened
9 years ago
0
Write test of the genotype extractor
#641
ihodes
closed
9 years ago
2
Color refactor
#640
jaclynperrone
closed
9 years ago
3
Test other views
#639
ihodes
closed
9 years ago
0
Add ".selected" class functionality to Runs table
#638
jaclynperrone
closed
8 years ago
0
Decide on Run vs. VCF & rename
#637
ihodes
opened
9 years ago
14
Test the cycledash.genotypes module
#636
ihodes
closed
9 years ago
1
Don't use OFFSET/LIMIT for genotypes pagination
#635
ihodes
opened
9 years ago
0
Include annotations in the downloaded VCF from Examine Page
#634
ihodes
opened
9 years ago
0
Make deploying & updating Cycledash incredibly easy
#633
ihodes
closed
9 years ago
2
Add regression test for cycledash.views.examine
#632
ihodes
closed
9 years ago
2
Update pileup
#631
danvk
closed
9 years ago
1
Attach tumor/normal bam to the run object being passed to the examine page
#630
ihodes
closed
9 years ago
1
User interviews
#629
hammer
closed
9 years ago
1
Extend Bootstrap grid and components to project.
#628
jaclynperrone
closed
9 years ago
3
Extend bootstrap styles
#627
jaclynperrone
closed
9 years ago
0
Display form errors on the form, not in an alert()
#626
ihodes
opened
9 years ago
0
Use nose.tools asserts in Python tests
#625
ihodes
opened
9 years ago
0
Show subobjects in JSON responses
#624
ihodes
closed
9 years ago
3
Improve error messages from the API
#623
ihodes
opened
9 years ago
0
Generate docs from API code
#622
ihodes
opened
9 years ago
0
Use voluptuous for marshal_with in the Python API
#621
ihodes
closed
9 years ago
1
Consolidate IGV Links
#620
danvk
closed
9 years ago
5
Deprecate links to IGV
#619
hammer
opened
9 years ago
1
Consolidate IGV links
#618
danvk
closed
9 years ago
3
Migrate and greatly simplify Python JSON API
#617
ihodes
closed
9 years ago
5
Bump pileup version
#616
danvk
closed
9 years ago
0
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