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hpcaitech
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FastFold
Optimizing AlphaFold Training and Inference on GPU Clusters
Apache License 2.0
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Update embedders.py
#193
Lix1993
opened
1 month ago
0
Could not run demo.py
#192
bj600800
opened
4 months ago
1
Installation failed ERROR: No matching distribution found for typing-extensions==4.3.0
#191
jumpintwo
closed
3 months ago
0
Request for guidance on generating fastfold training cache files
#190
morou34
opened
5 months ago
1
habana imporvement
#189
KimBioInfoStudio
opened
6 months ago
2
environment.yml conda env has conflicts
#188
Emptyset110
opened
6 months ago
0
Error unrecognized argument for --uniref30_database_path
#187
morou34
closed
5 months ago
0
cuda error
#186
hhh12345678990
opened
6 months ago
0
Inferring super large protein with reduced accuracy
#185
Ian-pku
opened
8 months ago
0
save the features.pkl file of the monomer
#184
double-vin
opened
8 months ago
0
mmcif_cache
#183
vetmax7
opened
11 months ago
8
RuntimeError: CUDA error: CUBLAS_STATUS_INVALID_VALUE when calling `cublasGemmEx(
#182
cdsnow
opened
12 months ago
2
About running time
#181
addsg
opened
1 year ago
0
Buggy scripts/download_all_data.sh
#180
tiansiyuan
opened
1 year ago
0
KeyError: 'msa_mask' Issue
#179
YoshitakaMo
opened
1 year ago
0
Trouble Running Perf.py in Benchmark
#178
chuhan-ouyang
closed
9 months ago
2
[hotfix] fix perf for api changing
#177
Gy-Lu
closed
1 year ago
0
Cannot run perf.py in benchmark
#176
chuhan-ouyang
closed
1 year ago
2
Core affinity issue
#175
jpetucci
opened
1 year ago
1
fix spelling error with README.md
#174
digger-yu
closed
1 year ago
0
Would it be possible to run this locally in computers/laptops with nvidia cuda drivers+docker?
#173
juankaamez
opened
1 year ago
3
submit unsuccessfully
#172
MrGao1997
opened
1 year ago
4
Invalid resolution format: ['?']
#171
HF06
closed
1 year ago
5
No module named fastfold_layer_norm_cuda
#170
davidesala
closed
1 year ago
1
About the recycle dimension
#169
semal
opened
1 year ago
1
Multimer training and BF16
#168
semal
opened
1 year ago
8
Dimension mismatch for einsum() in ops.py
#167
daniel-dpq
opened
1 year ago
3
local variable 'right_proj_act_rec' referenced before assignment
#166
semal
closed
1 year ago
1
Did fastfold support bfloat16 inference?
#165
semal
opened
1 year ago
5
DAP seems not work with 2 gpus
#164
semal
closed
1 year ago
8
Homodimer prediction missing chain
#163
s-kyungyong
opened
1 year ago
5
[conda] fixed colossalai dependency version
#162
FrankLeeeee
closed
1 year ago
0
add demo
#161
oahzxl
closed
1 year ago
0
AutoChunk
#160
georgkempf
opened
1 year ago
2
Allow running multiple jobs in the same node
#159
s-kyungyong
closed
1 year ago
1
[misc] add license
#158
ver217
closed
1 year ago
0
Multimer model scores
#157
s-kyungyong
opened
1 year ago
7
save prediction output pickle file of monomer
#156
double-vin
closed
1 year ago
0
Issues with processing the templates
#155
s-kyungyong
closed
1 year ago
2
[README] remove pre_built wheel of installation and update readme
#154
Gy-Lu
closed
1 year ago
0
[hotfix] Optimize template error msg, avoid no hit probs case
#153
Gy-Lu
closed
1 year ago
0
triton softmax support multi-batch
#152
Gy-Lu
opened
1 year ago
2
problem with multimer mode, ValueError: Could not parse description:
#151
wh277
closed
1 year ago
11
[CI]update colossalai installation
#150
Gy-Lu
closed
1 year ago
0
inference with lower memory usage
#149
double-vin
closed
1 year ago
1
[readme] enable some function by default
#148
oahzxl
closed
1 year ago
0
add seed_torch function
#147
double-vin
closed
1 year ago
0
added relaxation argument to select whether to run the relax operation
#146
double-vin
closed
1 year ago
1
optimize code for bwd performance and refine code.
#145
LeoZhao-Intel
closed
1 year ago
0
Template all atom mask was all zeros error
#144
double-vin
closed
1 year ago
6
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