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innate2adaptive
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Decombinator
Decombinator v4: fast, error-correcting analysis of TCR repertoires
https://innate2adaptive.github.io/Decombinator/
MIT License
22
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8
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Make Decombinator `pip` installable
#33
MVCowley
opened
2 months ago
0
ZeroDivisionError: division by zero
#32
yub-hutch
opened
4 months ago
8
Functionalise Decombinator Scripts
#31
MVCowley
closed
5 months ago
0
Downstream analysis
#30
nicodemus88
closed
6 months ago
3
Small error on README.md
#29
yutanagano
closed
4 months ago
1
Decombinator compatibility with Biopython
#28
TahelRonel
closed
4 months ago
1
Import Error: Bio.Alphabet has been removed from Biopython
#27
tp-peacock
closed
3 years ago
1
Update packages
#26
tp-peacock
closed
3 years ago
0
mouse will have blank cdr1 and cdr2 instead of crashing
#25
tp-peacock
closed
3 years ago
0
Clustering optimisation
#24
tp-peacock
closed
3 years ago
0
Dual index
#23
tp-peacock
closed
3 years ago
0
Upgrade Decombinator 3 to Decombinator 4
#22
tp-peacock
closed
4 years ago
0
Added fields to CDR3translator
#21
JamieHeather
closed
4 years ago
0
fix in case of multiple extensions to input filename
#20
tp-peacock
closed
4 years ago
0
V4
#19
tp-peacock
closed
4 years ago
0
Adding new SP2 indexes, update for v4
#18
tp-peacock
closed
4 years ago
0
Using other species gene sets from IMGT
#17
tprkp
opened
4 years ago
4
No insertions
#16
tp-peacock
closed
4 years ago
0
2019-07-15: CDR3translator v4 upgrade - more detailed/AIRRseq-complia…
#15
tp-peacock
closed
4 years ago
0
Improved clustering
#14
tp-peacock
closed
4 years ago
0
fix for incorrect number of deletions when no insertions
#13
tp-peacock
closed
4 years ago
0
Remove Collapsinator_V2
#12
tp-peacock
closed
5 years ago
0
New oligo and fast compression
#11
tp-peacock
closed
6 years ago
0
Remove old scripts
#10
tp-peacock
closed
6 years ago
0
All chains together
#9
tp-peacock
closed
6 years ago
0
All chains together
#8
tp-peacock
closed
6 years ago
0
Non-barcoding option (-nbc) produces an empty .n12 file
#7
JamieHeather
opened
7 years ago
0
Minor tweaks and changes
#6
JamieHeather
opened
7 years ago
0
Fix bracket bug, update readme
#5
JamieHeather
closed
7 years ago
0
Adding section of calling Decombinator from other scripts to README
#4
JamieHeather
closed
7 years ago
0
Sorting boolean flag usage and tidied scripts
#3
JamieHeather
closed
7 years ago
0
No extended mouse tags, and no gamma/delta translate files
#2
JamieHeather
opened
7 years ago
2
Adding README
#1
JamieHeather
closed
7 years ago
0