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jts
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sga
de novo sequence assembler using string graphs
http://genome.cshlp.org/content/22/3/549
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sga index output unexpectedly placed in working directory
#69
marcelm
opened
10 years ago
2
Made sga-preqc-report.py deal with bad json gracefully.
#68
deltadev
closed
10 years ago
0
sga index: -d does not make sense with -a ropebwt
#67
jts
closed
10 years ago
0
Describe the ASQG file format
#66
sjackman
closed
10 years ago
5
Add strand bias for errors
#65
lexnederbragt
opened
10 years ago
0
Option (flag) to restrict output to read quality plots
#64
lexnederbragt
closed
10 years ago
1
Could not getVertex(id), when id is the first one in scaffolds.m200.u25.scaf file
#63
Griffan
closed
10 years ago
0
Issue running 'make'
#62
BuddahKat
closed
10 years ago
2
Compile error
#61
borauyar
closed
10 years ago
4
preqc report
#60
travc
closed
10 years ago
1
evaluate with Software Sustainability Institute's criteria-based software evaluation
#59
mr-c
opened
10 years ago
0
sga-mergeDriver.pl improvements
#58
mr-c
opened
10 years ago
0
add a hotlink to src/README
#57
mr-c
closed
10 years ago
1
error: 'tr1/unordered_set' file not found
#56
sjackman
closed
10 years ago
14
Added argparse to sga-preqc-report.py
#55
LeeMendelowitz
closed
10 years ago
0
How to handle high depth data?
#54
Griffan
closed
10 years ago
5
"Assertion `numStrings < MAX_ELEMS' failed"
#53
kimrutherford
opened
10 years ago
6
Some error in preqc after compile
#52
rnjv
closed
10 years ago
2
Does not compile with most recent g++
#51
Legogris
closed
10 years ago
3
haplotype-filter: add header info fields for LM and O tags and do not leave trailing tabs
#50
mcshane
closed
11 years ago
1
Can't compile sga!!
#49
yashumayank
closed
11 years ago
2
COMPILE error: BamTools has not been declared
#48
apelin20
closed
11 years ago
3
Compile Error
#47
rwtaylor
closed
11 years ago
2
Compile Error
#46
rwtaylor
closed
11 years ago
2
sga stats does not compute error rates when --no-overlap parameter is given
#45
jts
opened
11 years ago
0
Compile error on MacOS X 10.7.4
#44
megancamilla
closed
11 years ago
2
Flag Modificiation to "keep-headers"
#43
DallasThomas
opened
11 years ago
0
added prefix for fm-merge
#42
idot
closed
11 years ago
3
Compile error on ubuntu 64bit
#41
maleasy
closed
11 years ago
2
Bamtools compile error - Sort.h "missing"
#40
dwcloud
closed
11 years ago
3
Compile error
#39
jpearl01
closed
11 years ago
11
Assertion failed in scaffold2fasta
#38
martijnvermaat
closed
11 years ago
1
CentOS 5.8 install
#37
jpearl01
closed
11 years ago
5
scaffold2fasta help message is unclear
#36
jts
closed
11 years ago
1
SGA requires OpenMP
#35
sjackman
closed
11 years ago
6
compile error
#34
cboursnell
closed
11 years ago
4
removed sga stats requirement for reverse index
#33
LeeMendelowitz
closed
11 years ago
0
bubble orientation fix
#32
LeeMendelowitz
closed
11 years ago
1
Bubble Orientation Issue
#31
LeeMendelowitz
closed
11 years ago
1
ld_set is static inline. Closes #29
#30
sjackman
closed
11 years ago
2
Linker error: undefined symbol ld_set
#29
sjackman
closed
11 years ago
0
Compile error on 32-bit Ubuntu
#28
LeeMendelowitz
closed
8 years ago
1
sga preprocess disable primer screen
#27
nathanhaigh
closed
11 years ago
1
preprocess --quality-scale bug
#26
nathanhaigh
closed
11 years ago
1
sga preprocess to also output orphaned paired reads
#25
nathanhaigh
closed
11 years ago
1
sga depends on some abyss programs, no errors to indicate this
#24
gringer
closed
12 years ago
1
division by zero error on output for sga-astat.py
#23
gringer
closed
12 years ago
1
Minor STDOUT updates
#22
nathanhaigh
closed
12 years ago
0
sga merge fails in trunk
#21
nathanhaigh
closed
12 years ago
1
first pull request
#20
nathanhaigh
closed
12 years ago
0
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