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kymata-atlas
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kymata-core
Core Kymata codebase, including statistical analysis and plotting tools
https://kymata.org
MIT License
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Data files should be able to be stored anywhere
#204
caiw
opened
8 months ago
0
Config-files should be parsed and validated centrally
#203
caiw
opened
8 months ago
0
`_display_welcome_message_to_terminal()` functions are duplicated, unused
#202
caiw
closed
7 months ago
1
Add a `CITATION.cff` file
#201
caiw
opened
8 months ago
1
Toolbox is able to operate on Dataset 3
#200
caiw
closed
6 months ago
1
Add test-coverage checks to CI
#199
caiw
opened
8 months ago
5
Create BEMs within the preproc pipeline
#198
caiw
opened
8 months ago
0
Fix pre-ave normalisation when loading EMEG data
#197
caiw
opened
8 months ago
1
Do we need to reduce memory overhead when working with source-space gridsearch?
#196
caiw
opened
8 months ago
0
Always get channel names when loading EMEG data
#195
caiw
opened
8 months ago
0
Clean IPPM drawing code
#194
caiw
opened
8 months ago
0
Implement unpaired axis plots for HexelExpressionSets
#193
caiw
closed
8 months ago
1
Preprocessing for visual/tactile stream yet
#192
caiw
closed
4 months ago
1
handle overlapping visual/audio triggers
#191
caiw
closed
4 months ago
1
Split EEG sensors left/right when doing sensor-space expression plots
#190
caiw
closed
8 months ago
5
Document the direction of the `audio_shift_correction` argument to `do_gridsearch`
#189
caiw
closed
4 months ago
1
Delete nans when loading matlab data, rather than setting them to 1.0
#188
caiw
closed
8 months ago
1
Settle on a fixed docstring format
#187
caiw
closed
5 months ago
1
Make sure main functions and __init__s have docstrings
#186
caiw
closed
5 months ago
2
Use new `type` syntax when dropping support for Python 3.11
#185
caiw
opened
8 months ago
1
Remove TODOs from `run_gridsearch.py`
#184
caiw
closed
8 months ago
1
move ave-vs-reps choice up to the function interface
#183
caiw
opened
8 months ago
0
use config for ppt lists etc
#182
caiw
closed
6 months ago
0
Make xticks of expression plots follow the data rather than being hard coded
#181
caiw
closed
8 months ago
1
Changing the default arguments in the gridsearch
#180
neukym
closed
7 months ago
0
xlims argument not working in expression_plot()
#179
neukym
closed
8 months ago
1
Fix for #128 syntax error in gridsearch
#178
neukym
closed
8 months ago
0
Fixing lint errors
#177
anirudh1666
closed
8 months ago
3
Fix all historic linting issues so the code passes new ruff checks
#176
neukym
closed
8 months ago
1
Adds Ruff linting corrections from `ruff . --fix`
#175
neukym
closed
8 months ago
0
Update invoker_run_hexel_current_estimation.py
#174
neukym
closed
8 months ago
0
Move all todos to issues
#173
neukym
closed
8 months ago
0
Morph logging medial
#172
neukym
closed
8 months ago
0
Speed up morph maps
#171
caiw
closed
8 months ago
4
Added channel sensitivity
#170
anirudh1666
closed
8 months ago
6
Tests for plotting code
#169
caiw
opened
9 months ago
0
164 fix 146 plotting bug
#168
caiw
closed
9 months ago
7
Can we run notebooks as part of CI?
#167
caiw
closed
9 months ago
3
Make sure gridsearch does not get applied to the medial wall
#166
neukym
opened
9 months ago
1
Remove medial wall hexels in order to improve source localisations
#165
neukym
closed
4 months ago
1
#146 Introduced some errors in accessing data in the .nkg files when plotting
#164
neukym
closed
9 months ago
1
Expression plot interface to visually group families of functions
#163
caiw
closed
9 months ago
1
rewrite config files and the files that read them to be only in seconds not milliseconds
#162
caiw
closed
9 months ago
1
Use sbatch array for SNRs directly
#161
caiw
closed
8 months ago
2
Revert gridsearch vertex workaround
#160
caiw
closed
9 months ago
0
Automatically ensure code quality using codefactor.io
#159
caiw
closed
8 months ago
7
Error submitting `submit_gridsearch.sh` with inverse operators and multiple subjects but no morph
#158
caiw
closed
9 months ago
0
Bugfixes for gridsearch
#157
caiw
closed
9 months ago
1
Error submitting gridsearch without inverse operators
#156
caiw
closed
9 months ago
0
Fix arg name
#155
caiw
closed
9 months ago
1
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