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lehner-lab
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DiMSum
An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies
MIT License
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DiMSum fails at Stage 4
#21
kevinmyers
opened
2 months ago
0
Help with understanding experimental design
#20
BournSupremacy
opened
3 months ago
6
invalid 'nt_seq' values
#19
mingbao96
closed
6 months ago
1
graphics issues with r-cairo > 1.5
#18
durr1602
opened
6 months ago
2
Can't find indels fitness scores
#17
BournSupremacy
closed
11 months ago
3
There were problems while running 'dimsum__merge_report'
#16
roserao
closed
10 months ago
0
cannot fit error model
#15
XinyuWu666
opened
1 year ago
3
Enable --mutagenesisType codon & --maxSubstitutions 1
#14
MaximilianStammnitz
opened
1 year ago
1
Clarify --maxSubstitutions argument
#13
ijhoskins
closed
1 year ago
1
Error: Cannot proceed with variant processing: No substitution variants found
#12
ijhoskins
closed
1 year ago
2
Requirements for use of DiMSum stages 4-5 with external count tables
#11
ijhoskins
closed
1 year ago
2
Clarify section in FILEFORMATS.md
#10
ijhoskins
closed
1 year ago
1
Miss-called sequence
#9
mel9320107
closed
1 year ago
2
Cannot proceed with error modelling
#8
shrutikhare-git
closed
1 year ago
4
"WT variant not found. Did you mean to specify one of the following?"
#7
carolinelangley
closed
1 year ago
26
Error in quantile.default
#6
liatia
closed
1 year ago
9
Is it possible to have input replicates in the same experiment?
#5
CharlesJB
closed
2 years ago
6
Error: Cannot proceed with variant processing: WT variant not found
#4
shrutikhare-git
closed
1 year ago
9
Feature request: annotate genetic variants in standard nomenclature
#3
ijhoskins
closed
2 years ago
3
Error in stage 1
#2
ijhoskins
closed
3 years ago
18
fitness_wildtype.txt missing merged fitness & error values
#1
jschmiedel
closed
4 years ago
2