issues
search
lindenb
/
jvarkit
Java utilities for Bioinformatics
https://jvarkit.readthedocs.io/
Other
482
stars
133
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Blast2Sam error
#53
xx152
closed
8 years ago
17
MIN_COVERAGE doesn't seem to work
#52
hamidhamzeiy
closed
8 years ago
5
boum ### vs ### error when running blastn2snp
#51
heh30
closed
8 years ago
6
make: *** No rule to make target ... package-info.java', needed by 'biostar140111'. Stop.
#50
mmokrejs
closed
8 years ago
5
remove brackets in sequences
#49
CNoune
closed
8 years ago
2
fixvcfmissinggenotypes stuck at reading vcf from stream
#48
MaoYafei
closed
6 years ago
13
sam validation error from pcrclipreads
#47
avilella
closed
8 years ago
8
multipass PcrClipReads
#46
avilella
opened
8 years ago
2
compilation error since last git pull
#45
avilella
closed
8 years ago
9
error overlapping PCR intervals - pcrclipreads
#44
avilella
opened
8 years ago
4
feature request: PcrClipReads based on a flag
#43
avilella
closed
5 years ago
3
Curl issue in Makefile when downloading htsjdk
#42
xchrom
closed
8 years ago
2
Can it take input with only 2 sequecnes?
#41
mbk0asis
opened
8 years ago
0
biostar94573 and multiple sequence alignments
#40
ntchuang
opened
8 years ago
4
core dumped xsltproc vcffilterjs when make
#39
WRui
closed
6 years ago
6
SamToPsl adds the flag to the bed name field
#38
maximilianh
closed
8 years ago
6
FixVcfMissingGenotypes can't find bams
#37
arundurvasula
closed
8 years ago
3
backlocate doesn't find some known 3' mutations
#36
bertgold
closed
8 years ago
4
Biostar94573 : Need some additional Informations regarding Input/Output
#35
X-24
closed
8 years ago
3
Issues making Jvarkit
#34
X-24
closed
8 years ago
8
biostar94573 reference sequence reading issue
#33
vfgoliveira
closed
9 years ago
5
fixed memory leak in Biostar154220
#32
dakl
closed
9 years ago
2
Biostar154220/CapBam memory usage
#31
dakl
closed
9 years ago
2
Genotyping of all positions
#30
Coryza
closed
6 years ago
2
biostart94573.jar appears to hang (S+ state)
#29
djrotenberg
closed
9 years ago
3
Feature request Biostar77288 - different visualisation possible ?
#28
colindaven
closed
9 years ago
3
Error building 'mapuniprot'
#27
marc-sturm
closed
9 years ago
5
blastn2snp problem
#26
mrb20045
closed
9 years ago
6
Update Makefile to fix compilation in Mac
#25
edgardomortiz
closed
9 years ago
1
BamStats04 does not recognize IN= or I=
#24
apelin20
closed
9 years ago
2
Error making vcfrenamesamples
#23
aslett1
closed
9 years ago
4
PreCompiled binaries?
#22
apelin20
closed
9 years ago
7
ability to copy particular fields in vcfviewgui
#21
rjsicko
opened
9 years ago
0
VcfGO
#20
kellermac
closed
9 years ago
1
quote classpath of in bash wrappers to allow for paths with spaces
#19
dakl
closed
9 years ago
1
Avg coverage calculation
#18
ramaniak
closed
9 years ago
2
compilation error...?
#17
sleepingworm
closed
9 years ago
4
How do I cite this?
#16
apelin20
closed
9 years ago
1
error when running the packages
#15
tatianaalmeida
closed
9 years ago
17
backlocate shifts genomic position by 1 base
#14
RamRS
closed
10 years ago
4
backlocate errors out
#13
RamRS
closed
10 years ago
3
Compiling jvarkit
#12
nmb85
closed
10 years ago
1
SAXParseException when building backlocate
#11
sargant
closed
10 years ago
3
htslib doesn't upgrade
#10
dakl
closed
10 years ago
1
MAPQ should be 0
#9
apelin20
opened
10 years ago
1
Trouble with ant when installing jvarkit
#8
apelin20
closed
10 years ago
2
biostar103303 tool gives same value for "exon.count_prev_and_curr" and "exon.count_curr_and_next"
#7
vikasbansal
closed
10 years ago
9
compile error "LineIteratorImpl"
#6
HIM72
closed
10 years ago
3
compile error
#5
ghost
closed
10 years ago
5
Making contained optional
#4
johandahlberg
closed
10 years ago
2
Previous
Next