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macroevolution
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bamm
A program for multimodel inference on speciation and trait evolution
GNU General Public License v2.0
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BAMMtools cleanup
#91
drabosky
closed
10 years ago
6
sphinx: postprocess documentation, critical eyes needed
#90
drabosky
closed
10 years ago
10
Check BAMMtools for upload to CRAN
#89
drabosky
closed
10 years ago
8
Should have a Contact Us page
#88
redcurry
closed
10 years ago
5
Non-finite initial log-likelihoods
#87
drabosky
closed
10 years ago
0
Max E Prob in SpExModel.cpp
#86
drabosky
closed
10 years ago
1
Tracer compatible MCMC output?
#85
jonchang
opened
10 years ago
0
Fix "polytomy" msg for trees with dos line endings
#84
jonchang
closed
10 years ago
0
plot.bammdata / multi plot / color mapping
#83
drabosky
closed
10 years ago
4
Agree on C++ standard for documenting code?
#82
drabosky
opened
10 years ago
1
Do simulate priors after checking for tree correctness
#81
redcurry
closed
10 years ago
3
updateLambdaShift bug?
#80
drabosky
opened
10 years ago
3
calculation inefficiencies in Model
#79
drabosky
closed
10 years ago
1
Simulating prior distributions crashes at low number of generations
#78
redcurry
closed
10 years ago
1
time integrated branch rate and other R fxns
#77
drabosky
closed
10 years ago
2
Possible (mis) handling of event data in plot.bammdata and other fxns?
#76
drabosky
closed
10 years ago
1
support for node labels?
#75
drabosky
closed
10 years ago
0
fixing syntax errors in docs
#74
SimonGreenhill
closed
10 years ago
0
Documentation code blocks
#73
SimonGreenhill
closed
10 years ago
1
Tweaking tutorial
#72
SimonGreenhill
opened
10 years ago
1
Revive lost fix to zero length root node
#71
redcurry
closed
10 years ago
0
Remove acceptWriteFreq from documentation
#70
redcurry
closed
10 years ago
1
whitespace in input files
#69
drabosky
closed
10 years ago
1
chicken proprioception module
#68
drabosky
closed
10 years ago
3
Compiled versions of BAMM for main page
#67
drabosky
closed
10 years ago
2
Final sphinx documentation for pre-release
#66
drabosky
closed
10 years ago
3
reliance on environment variables / BAMMtools
#65
drabosky
closed
10 years ago
1
Exponential change reparameterization
#64
drabosky
closed
10 years ago
3
New class implementation for all prior calculations
#63
drabosky
closed
10 years ago
1
updates mu0 even when updateRateMu0 = 0
#62
drabosky
closed
10 years ago
1
BAMM fails on trees with a root edge
#61
drabosky
closed
10 years ago
1
loadEventData broken
#60
ptitle
closed
10 years ago
8
BAMM important parameter checks for release
#59
drabosky
closed
10 years ago
1
BAMM crashing with ultrametric check
#58
drabosky
closed
10 years ago
12
plot.bammdata colors
#57
drabosky
closed
10 years ago
1
BAMM control parameter changes
#56
drabosky
closed
10 years ago
0
BAMMtools documentation corrupt on Ubuntu R
#55
jeffjshi
closed
10 years ago
3
sampling fractions
#54
ptitle
closed
10 years ago
15
need new subset bammdata function for subtrees
#53
drabosky
closed
10 years ago
2
bammtools fxns & data names
#52
drabosky
closed
10 years ago
0
plot.bammdata stuff
#51
drabosky
closed
10 years ago
5
Write R package documentation
#50
redcurry
closed
10 years ago
0
Finish writing BAMMtools documentation
#49
redcurry
closed
10 years ago
6
Update Configuration & Settings pages
#48
redcurry
closed
10 years ago
1
Write Quick-start guide to BAMM
#47
redcurry
closed
10 years ago
2
Write theoretical background
#46
redcurry
closed
10 years ago
0
Check tree for same tip node names
#45
redcurry
closed
10 years ago
4
Build fails on Joseph's Mac OS X v. 10.9.1
#44
redcurry
closed
10 years ago
10
Checks prior to running BAMM
#43
jeffjshi
closed
10 years ago
14
Class bammdata
#42
blueraleigh
closed
10 years ago
1
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