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matthiaskoenig
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fbc_curation
FROG analysis in python for the reproducibility of FBC models
https://runfrog.de
GNU Lesser General Public License v3.0
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Compat with frog spec 0.1.3
#99
exaexa
closed
9 months ago
0
`runfrog` does not work via github actions or local installation
#98
famosab
opened
1 year ago
1
Allow comparison to be used from command line
#97
fbergmann
opened
1 year ago
0
Incorrect flux written in FVA for objective
#96
matthiaskoenig
closed
1 year ago
0
Update from develop
#95
github-actions[bot]
closed
1 year ago
1
Fix naming issues (harmonization)
#94
matthiaskoenig
closed
1 year ago
1
Websocket communication between frontend and backend
#93
matthiaskoenig
opened
2 years ago
0
Split execution of tasks in multiple subtasks & feedback
#92
matthiaskoenig
opened
2 years ago
0
Render results in tables/metadata
#91
matthiaskoenig
opened
2 years ago
0
Fix NaN serialization issue
#90
matthiaskoenig
closed
2 years ago
0
Fix and update docker containers/dependencies
#89
matthiaskoenig
closed
2 years ago
0
Add tests for celery worker
#88
matthiaskoenig
closed
2 years ago
0
Update website dependencies
#87
matthiaskoenig
closed
2 years ago
0
Update readthedocs
#86
matthiaskoenig
closed
2 years ago
0
Add documentation to webpage
#85
matthiaskoenig
opened
2 years ago
0
changes for version 0.2.0
#84
matthiaskoenig
closed
2 years ago
0
New website release
#83
matthiaskoenig
opened
2 years ago
0
Update documentation with latest commands and outputs
#82
matthiaskoenig
closed
2 years ago
0
Support comparison with other reference files
#81
matthiaskoenig
opened
2 years ago
0
Fix mypy issues
#80
matthiaskoenig
closed
2 years ago
0
Fix flake8 issues
#79
matthiaskoenig
closed
2 years ago
0
Fix failing tests
#78
matthiaskoenig
closed
2 years ago
0
Rename master to main branch
#77
matthiaskoenig
closed
2 years ago
0
Add icon and description to release notes
#76
matthiaskoenig
closed
2 years ago
0
Updates towards v0.2.0
#75
matthiaskoenig
closed
2 years ago
0
Better filename for OMEX archive
#74
matthiaskoenig
closed
2 years ago
3
Better documentation of FROG report
#73
matthiaskoenig
closed
2 years ago
0
Update documentation of comparison with reference files
#72
matthiaskoenig
closed
2 years ago
1
Fix 500 issue and crashes with Pedro model
#71
matthiaskoenig
closed
2 years ago
1
Add JSON output for tool
#70
matthiaskoenig
opened
2 years ago
0
Bug when running FROG: cannot import name 'soft_unicode' from 'markupsafe'
#69
matthiaskoenig
closed
2 years ago
1
Link fbc_curation and other tools on runfrog.de
#68
matthiaskoenig
opened
2 years ago
0
Update SSL certificates
#67
matthiaskoenig
closed
2 years ago
0
Upgrade to cameo 0.13.6
#66
matthiaskoenig
closed
2 years ago
0
Upgrade to cobra 0.24.0
#65
matthiaskoenig
closed
2 years ago
0
Support python 3.10
#64
matthiaskoenig
closed
2 years ago
0
fbc_curation does not set the solver and metadata can be misleading
#63
glucksfall
opened
2 years ago
0
valid SBML-file throws non-valid SBML error
#62
uliebal
closed
2 years ago
3
Update to cameo==0.13.6
#61
matthiaskoenig
closed
2 years ago
1
Improve API error handling
#60
matthiaskoenig
opened
2 years ago
0
Handle paths with special characters
#59
matthiaskoenig
opened
2 years ago
0
Run benchmark evaluation
#58
matthiaskoenig
opened
2 years ago
0
New package release
#57
matthiaskoenig
closed
2 years ago
0
Issue with COVID model
#56
matthiaskoenig
closed
2 years ago
1
Improve FROG webservice/site
#55
matthiaskoenig
closed
2 years ago
1
Error when uploading a model or creating a report via the web interface of runfrog.de
#54
draeger
closed
2 years ago
1
Forward www.runfrog.de
#53
matthiaskoenig
closed
2 years ago
0
Implement rounding for reproducible results
#52
matthiaskoenig
closed
2 years ago
1
Bug reading serialized JSON due to infeasible values
#51
matthiaskoenig
closed
2 years ago
0
Document metadata
#50
matthiaskoenig
opened
2 years ago
0
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