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mcanouil
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eggla
Early Growth Genetics Longitudinal Analysis.
https://m.canouil.dev/eggla/
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fix: ID ordering differences *_aucs() / *_slopes()
#128
mcanouil
closed
2 weeks ago
0
ID ordering differences regarding eggla_aucs() and eggla_slopes()
#127
DrGengWang
closed
2 weeks ago
1
fix: use ID as character and use merge to combine data.frames/matrices.
#126
mcanouil
closed
3 weeks ago
0
build: growthcleanr from GitHub
#125
mcanouil
closed
9 months ago
0
`growthcleanr` has been archived from CRAN
#124
mcanouil
closed
9 months ago
2
chore: 1.0.0-pre
#123
mcanouil
closed
10 months ago
0
ci: add dev devcontainer and tweak workflow
#122
mcanouil
closed
10 months ago
0
chore: update cff
#121
mcanouil
closed
10 months ago
0
chore: devcontainer update via dependabot
#120
mcanouil
closed
10 months ago
0
chore: bump year license
#119
mcanouil
closed
10 months ago
0
build(deps): bump docker/login-action from 2 to 3
#118
dependabot[bot]
closed
1 year ago
0
build(deps): bump actions/checkout from 3 to 4
#117
dependabot[bot]
closed
1 year ago
0
fix: GWAS function output file to tab separated
#116
mcanouil
closed
1 year ago
2
GWAS function output file to tab separated
#115
annihei
closed
1 year ago
9
Covariates and slopes
#114
burrowsk
opened
1 year ago
6
Currently in `egg_model` (and related), warnings are not necessarily captured
#113
mcanouil
opened
1 year ago
0
fix: turns warnings into errors temporarily and internally
#112
mcanouil
closed
1 year ago
6
fix: fail model for low EM iterations
#111
mcanouil
closed
1 year ago
0
Increase of number of iterations for the EM algorithm `niterEM`
#110
burrowsk
closed
1 year ago
5
fix: software version and PLINK2 output
#109
mcanouil
closed
1 year ago
0
build: update PLINK2 to 11th of April 2023 version
#108
mcanouil
closed
1 year ago
0
New version of run_eggla_gwas not working
#107
annihei
closed
1 year ago
16
chore: update domain
#106
mcanouil
closed
1 year ago
0
chore: prepare 0.19.0 release
#105
mcanouil
closed
1 year ago
0
fix: replace slopes_dt with aucs_dt in outlier removal
#104
mcanouil
closed
1 year ago
0
fix: Title of residual plots in run_eggla_lmm()
#103
mcanouil
closed
1 year ago
0
Title of residual plots in run_eggla_lmm()
#102
burrowsk
closed
1 year ago
0
Inconsistent use of vep and vep_file in run_eggla_gwas()
#101
burrowsk
closed
1 year ago
1
Replace slopes_dt with aucs_dt in outlier removal [run_eggla_lmm()]
#100
burrowsk
closed
1 year ago
0
fix: update step parameter in APAR
#99
mcanouil
closed
1 year ago
0
Update default value for compute_apar function
#98
nwarrington
closed
1 year ago
1
fix: statistics from GWAS
#97
mcanouil
closed
1 year ago
12
N and EAF definition
#96
annihei
closed
1 year ago
10
docs: roxygen2::roxygenise()
#95
mcanouil
closed
1 year ago
0
fix return in roxygen block
#94
Ning-L
closed
1 year ago
0
chore: update email
#93
mcanouil
closed
2 years ago
0
fix: HWE_P should be NA for imputed variants
#92
mcanouil
closed
2 years ago
1
HWE_P in run_eggla_gwas() results inconsistent with analysis plan
#91
annihei
closed
2 years ago
6
Release `eggla` `v1.0.0`
#90
mcanouil
closed
10 months ago
5
fix: parameters table for cor
#89
mcanouil
closed
2 years ago
0
Incorrect parameter correlations
#88
burrowsk
closed
2 years ago
4
fix: INFO_TYPE description given to genotyped SNPs
#87
mcanouil
closed
2 years ago
0
INFO_TYPE description given to genotyped SNPs
#86
annihei
closed
2 years ago
5
feat: all parameters correlations
#85
mcanouil
closed
2 years ago
0
All parameters correlations
#84
mcanouil
closed
2 years ago
0
some dumb changes
#83
mcanouil
closed
2 years ago
0
chore: bump to dev version
#82
mcanouil
closed
2 years ago
1
fix: rename R2 to INFO if exists
#81
mcanouil
closed
2 years ago
0
Error in run_eggla_gwas when use_info=TRUE
#80
annihei
closed
2 years ago
8
Outlier plot legend getting mixed
#79
annihei
closed
2 years ago
2
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