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mikeblazanin
/
gcplyr
gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data
https://mikeblazanin.github.io/gcplyr/
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Add warning when metadata rows/cols are out of range
#168
mikeblazanin
closed
1 year ago
0
Allow specification of join type in merge_dfs
#167
mikeblazanin
closed
1 year ago
0
Better warning in make_design when rows or cols specified for a design are outside of nrows or ncols
#166
mikeblazanin
closed
1 year ago
0
Clarify that max dens is only carrying capacity if your density plateaus
#165
mikeblazanin
closed
1 year ago
0
Enable handling of data where wells are rows
#164
mikeblazanin
opened
1 year ago
0
Make possible reading of other file formats more obvious
#163
mikeblazanin
closed
1 year ago
0
number vignette names
#162
mikeblazanin
closed
1 year ago
1
merge_dfs can only drop when using merge functionality, not collapse-only
#161
mikeblazanin
closed
1 year ago
1
class of output in make_design
#160
mikeblazanin
opened
1 year ago
0
solve_linear & other functions not listed in package index
#159
mikeblazanin
closed
1 year ago
1
Fix error on CRAN old windows tests
#158
mikeblazanin
closed
1 year ago
2
Failure with CRAN gcplyr and dev waldo
#157
hadley
closed
1 year ago
3
max and min are S3 for the max and min methods, not their own functions
#156
mikeblazanin
closed
1 year ago
1
change uses of which.min and which.max to gc versions in vignettes
#155
mikeblazanin
closed
1 year ago
1
Vignette recommendations for when which.max will be run on all NA's
#154
mikeblazanin
closed
1 year ago
1
better handling of negative y values in calc_deriv when percapita = TRUE
#153
mikeblazanin
opened
1 year ago
1
Test to check subfunction calls that might have the same args
#152
mikeblazanin
opened
1 year ago
0
Add an na.string arg to paste_blocks and separate_tidy
#151
mikeblazanin
opened
1 year ago
0
add warning for when lookup table is unlikely to be properly set in make_design
#150
mikeblazanin
closed
1 year ago
1
Time is confusingly in two different units in vignette changing derivative units section
#149
mikeblazanin
closed
1 year ago
1
Currently merge_dfs drops by complete.cases but make_design uses "NA" for missing entries
#148
mikeblazanin
closed
1 year ago
2
[Vignette] Name uncommon Arguments in function calls
#147
discoleo
closed
1 year ago
2
better warning for when trans_y = 'log' produces NA's in calc_deriv
#146
mikeblazanin
closed
1 year ago
1
allow unquoted 1 for pattern in make_design
#145
mikeblazanin
closed
1 year ago
1
allow pattern to be optional when using make_designpattern
#144
mikeblazanin
closed
1 year ago
1
allow mixing of numbers and from_excel in vectorized rows & cols
#143
mikeblazanin
closed
1 year ago
1
make_design: Could expand.grid be useful?
#142
discoleo
opened
1 year ago
1
[Man] make_designpattern: Example uses deprecated make_tidydesign
#141
discoleo
closed
1 year ago
1
Demo Function: demo_design
#140
discoleo
closed
10 months ago
0
Run Regex-functions on the Vector
#139
discoleo
opened
1 year ago
0
change smooth_data when return_fitobject = TRUE
#138
mikeblazanin
closed
1 year ago
1
Make hex sticker
#137
mikeblazanin
opened
1 year ago
0
Function from_excel: Improving code
#136
discoleo
opened
1 year ago
1
Refactoring Code: Split file functions.R
#135
discoleo
closed
1 year ago
1
Add death, max death rate, adaptation time to analyze vignette
#134
mikeblazanin
opened
1 year ago
0
Utility Function: seq.character
#133
discoleo
opened
1 year ago
1
Example-making function
#132
mikeblazanin
closed
1 year ago
1
Documentation phrasing to be broader: microbial
#131
mikeblazanin
closed
1 year ago
1
Option to avoid edge cropping with smooth_data methods
#130
mikeblazanin
opened
1 year ago
0
Function for correcting for non-linearity at high OD
#129
mikeblazanin
opened
1 year ago
0
Doubling time function
#128
mikeblazanin
closed
1 year ago
1
Auc handling of negative values
#127
mikeblazanin
closed
1 year ago
1
Enhancements to auc: blanks and trans_y
#126
mikeblazanin
opened
1 year ago
0
Add common growth curve analysis outputs to vignettes
#125
mikeblazanin
closed
1 year ago
1
All summary stats function
#124
mikeblazanin
opened
1 year ago
0
Helper Function: format.time
#123
discoleo
opened
1 year ago
2
understandable error when names are forgotten in make_design
#122
mikeblazanin
closed
1 year ago
1
add x_scale to functions that use window_width so that window_width can be provided in alternate units
#121
mikeblazanin
opened
1 year ago
1
add warning in calc_deriv or smooth_data when unlikely to be grouped properly
#120
mikeblazanin
closed
1 year ago
1
increase conciseness in vignettes: preprocessing, processing, analyze, noise, conclusion
#119
mikeblazanin
closed
1 year ago
3
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