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nanoporetech
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dorado
Oxford Nanopore's Basecaller
https://nanoporetech.com/
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C++ warnings being treated as errors with GCC 12.3.0
#779
boegel
opened
2 months ago
1
Call standalone Dorado from minKNOW installation
#778
mgperry
closed
1 month ago
1
A few duplex questions
#777
godotgildor
closed
2 months ago
1
Basecalling speed on M2 pro
#776
chinmaysharmacs10
closed
2 months ago
1
Inconsistencies in '--no-trim' results
#775
DepledgeLab
closed
1 month ago
2
Install error in M1 mac
#774
junjunxy
closed
2 months ago
2
Can a Linux server without a GPU and only a CPU install and run Dorado？
#773
q1134269149
closed
2 months ago
1
Cannot get Dorado to work on a Jetson AGX
#772
hasindu2008
opened
2 months ago
10
How to apply the 5K 6mA model under a 4K data sampling frequency?
#771
LuckyJao
closed
1 month ago
1
Reducing the proportion of unclassified reads (dorado versions and trimming options)
#770
ezherman
closed
4 weeks ago
4
Query on Handling Sense Reads Exclusively with dorado basecalling
#769
VahidJavaran
closed
2 months ago
2
Dorado 0.5.3 - memory issues - BAM truncated?
#768
cfrias-cnag
opened
2 months ago
20
Unknown modification variant: '6mA/gpfs2' - Choices: 6mA, 5mC, m6A_DRACH, 5mCG_5hmCG, 5mCG, 5mC_5hmC
#767
habibsaky
closed
2 months ago
5
general question; not an issue
#766
mocherry
closed
2 months ago
1
dorado_basecall_server --version hangs indefinitely and MinKNOW installation fails
#765
linsalrob
closed
1 month ago
2
terminate called without an active exceptions
#764
selmapichot
closed
2 months ago
2
Dorado Tests Failed After Successful Compile
#763
pbpearman
closed
1 month ago
10
Using Dorado for mycobacterial Data.
#762
AzlanNI
closed
3 weeks ago
9
finalise() HtsFile error
#761
jacobscgc
closed
2 months ago
4
Using Dorado for Nanopore Mycobacterial Data
#760
AzlanNI
closed
2 months ago
0
Inquiry Regarding Slow Performance with Dorado Basecaller
#759
xiangpingyu
opened
2 months ago
10
Can't open dorado (Closes immediately)
#758
Ceres90
closed
2 months ago
2
Error! unable to open SAM/BAM/CRAM file at /gpfs2/scratch/mmolla/Z/
#757
habibsaky
closed
2 months ago
9
Is it possible to set demux to use only barcodes present in sample sheet ?
#756
olawa
opened
2 months ago
4
How to live basecall with methylation but output be uBAM
#755
ethan-mcq
closed
1 month ago
1
very slow on Dorado basecaller with "--estimate-poly-a" and "-x cpu"
#754
guifengwei
closed
2 months ago
1
Question about basecalling and alignment
#753
nikj26
closed
2 months ago
5
Restrict dorado GPU memory usage ?
#752
RxLoutre
closed
2 months ago
3
What does `--emit-moves` in the basecaller do?
#751
skranz0
closed
2 months ago
2
Remora model support
#750
jorisbalc
closed
2 months ago
2
Argument order with wildcard data path
#749
malton-ont
closed
2 months ago
2
CUDA device requested but no devices found.
#748
nikj26
closed
2 months ago
4
Values of the mean_qscore_template field in sequencing_summary.txt files are integers instead of floats
#747
jourdren
closed
1 month ago
2
Failed to read bam records with unclassified files after demux
#746
RxLoutre
closed
2 months ago
6
[error] Maximum number of positional arguments exceeded
#745
habibsaky
closed
2 months ago
6
Order of positional arguments and options matters when specifying modified basecall models for downloaded models
#744
janpb
closed
2 months ago
1
Issue about merge multiple pod5 files
#743
xiangpingyu
closed
2 months ago
6
Add --emit-summary option to dorado basecaller
#742
jourdren
opened
2 months ago
1
i miss guppy's barcoding_summary.txt (enhancement)
#741
Puputnik
opened
2 months ago
2
c10::OutOfMemoryError on simplex basecalling, dorado v0.6.0
#740
cocvincent
closed
1 month ago
4
Dorado demultiplexing and demuxing for classification of barcoded reads
#739
AMBL-CW
closed
1 month ago
5
Question: using 5mC_5hmC and 6mA models simultaneously or not?
#738
VahidJavaran
closed
2 months ago
3
Significant slowdown when adding mA modification model
#737
simondrue
opened
2 months ago
3
cmake error
#736
t100114
closed
2 months ago
3
Dorado version nomenclature on minKNOW
#735
selmapichot
closed
2 months ago
2
Resume dorado running out of HPC walltime out on nextflow script
#734
setshabaTaukobong
closed
2 months ago
3
Any Duplex Models for R9.4.1
#733
StephDC
closed
2 months ago
4
Combine modified bam files rather than re-basecalling
#732
samuelmontgomery
closed
2 months ago
4
fastq encoding
#731
Andreas-Bio
closed
2 months ago
2
very basic question, not an issue
#730
mocherry
closed
2 months ago
3
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