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nanoporetech
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ont_fast5_api
Oxford Nanopore Technologies fast5 API software
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Unable to copy object (file read failed) on parallel FS
#84
matzmz
opened
4 months ago
0
fast5_compress error:
#83
sahoo2000
opened
8 months ago
0
compress_fast5 command
#82
senukobla
opened
8 months ago
1
single_to_multi_fast5 do not collect all the single files if the input folder contains mixed types of fast5 files.
#81
Marjan-Hosseini
opened
9 months ago
0
Directly cast dataset into desired type instead of using it as a cont…
#80
nileshpatra
closed
2 weeks ago
1
similar API for pod5?
#79
assafgrw
opened
11 months ago
2
demux_fast5: `python3.9(20125,0x7ff84e0ee640) malloc: *** error for object 0x1110417b0: pointer being freed was not allocated`
#78
richardstoeckl
opened
1 year ago
0
error when converting single read to multi read
#77
Vsd1106
closed
1 year ago
1
demux_fast5 demultiplexing every single read by readID instead of barcode name
#76
Violeta-de-Anca
closed
1 year ago
4
fast5_subset to take list of .fast5 files
#75
MustafaElshani
closed
1 year ago
1
Some problem of multi_to_single_fast5
#74
Bin-Ma
closed
1 year ago
6
WARNING:Fast5Filter:xxx reads not found!
#73
markme123
opened
2 years ago
8
the function get_latest_analysis fails after upgrading MinKNOW to version 21 and onward
#72
avielmiluz
closed
2 years ago
6
compress_fast5 not compressing?
#71
mawa86
closed
2 years ago
2
The labels in the "end_reason" data type get lost when using compress_fast5
#70
hasindu2008
closed
2 years ago
7
multi_to_single_fast5 problem
#69
FerchoHQ
closed
2 years ago
3
demultiplexing generates additional - folder
#68
Fatihlrcfs
closed
2 years ago
3
subset obtained with fast5_subset does not work for guppy
#67
ndierckx
closed
2 years ago
3
demux_fast5 resume list
#66
SkabbiVML
opened
2 years ago
1
multi_to_multi_fast5
#65
nick-youngblut
opened
2 years ago
2
vbz compression compatibility with guppy_basecaller
#64
nick-youngblut
closed
2 years ago
2
Multi to single fast5 goes into sleep
#63
kaltinel
closed
2 years ago
7
fast5_subset OSError
#62
ndierckx
closed
2 years ago
4
Issues attempting to duplicate reads
#61
CodingKaiser
closed
2 years ago
8
'demux_fast5' (and 'fast5_subset') for single read fast5s
#60
AAnnan
closed
2 years ago
5
--filename_base behaves differently in 'fast5_subset'
#59
AAnnan
opened
3 years ago
2
--sanitize can't be used with --in_place with compress_fast5
#58
mattloose
closed
3 years ago
2
ERROR:ont_fast5_api.conversion_tools.multi_to_single_fast5:Unable to open file
#57
123chenshixin
closed
3 years ago
1
filesize increased reconverting vbz compressed fast5 back to gzip compression
#56
biolene
closed
3 years ago
13
multi_to_single_fast5 generated only 4000 single fast5
#55
Johnsonzcode
closed
3 years ago
13
Guppy default modified base calling configuration file doesn't exist
#54
JayVaz18
closed
3 years ago
1
mounting error
#52
xj-Liang-Olga
closed
3 years ago
2
fast5_subset failing mid-run
#51
irenenewton
closed
3 years ago
6
fast5_subset is missing?
#50
kaykay202
closed
3 years ago
1
[M]: add tombo resquiggle
#49
loganylchen
closed
3 years ago
5
Update LICENSE.txt URL schemes: http -> https
#48
thequicksort
closed
3 years ago
1
Metadata from multifast5
#47
usamec
opened
3 years ago
1
Error when running compress_fast5 but seems to complete
#46
callumparr
closed
3 years ago
3
Question: subset by barcode
#45
JWDebler
closed
3 years ago
10
Decompression
#44
jamez-eh
closed
3 years ago
10
multi_to_single_fast5 hanging
#43
fbrennen
closed
4 years ago
1
no space left on device [errno28]
#42
cyber-ux
closed
4 years ago
9
multi_to_single_fast5 command give syntax error
#41
aman21392
closed
4 years ago
5
ERROR:ont_fast5_api.conversion_tools.multi_to_single_fast5:Could not convert Multi->Single for file type 'single-read' with path
#40
akk01
opened
4 years ago
4
Check if the Fast5 is multi-read or single-read
#39
akk01
closed
4 years ago
1
single_to_multi_fast5 compression is not working ?
#38
svennd
closed
4 years ago
5
How to get info from fast5?
#37
renzilin
closed
4 years ago
2
Can I subsample Nanopore fast5/fastq with this tool?
#36
jolespin
closed
4 years ago
7
sequencing_summary.txt for fast5_subset output
#35
mmiladi
closed
4 years ago
4
Decompress/repack from VBZ to GZIP or something option compatible with squiggle tools
#34
callumparr
closed
4 years ago
6
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