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natverse
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fafbseg
Support functions for analysis of Drosophila connectomes especially the FAFB-FlyWire whole brain
https://natverse.org/fafbseg/
GNU General Public License v3.0
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Chunk flywire_rootid lookups
#111
jefferis
closed
3 years ago
0
dracor issue
#110
dokato
closed
3 years ago
1
Using ngl_add_colours: retain segment order when displaying in flywire
#109
mmc46
opened
3 years ago
0
Add ids type info to flywire_partners()
#108
YijieYin
closed
2 years ago
0
flywire_ntpred() gives ids in numbers, not characters
#107
YijieYin
closed
2 years ago
2
Warn when trying to fetch synapse details from spine
#106
jefferis
closed
3 years ago
0
fix flywire_partner_summary when neurons have no synapses
#105
jefferis
closed
3 years ago
1
ignore root ids without synapses in flywire_partner_summary()
#104
YijieYin
closed
3 years ago
1
unique(ids) for flywire_partner_summary()
#103
YijieYin
closed
3 years ago
1
Feature/save cloudvolume meshes
#102
jefferis
closed
3 years ago
0
flywire_xyz2id() confuses 3 character coordinates with separate x y z coordinates
#101
YijieYin
closed
3 years ago
0
Created flywire_synapse_annotations
#100
alexanderbates
closed
3 years ago
2
Feature/simpler pyinstall
#99
jefferis
closed
3 years ago
0
Feature/persistent cache
#98
jefferis
closed
3 years ago
0
ngl_add_colour need to fix df to list
#97
SiqiFang
closed
3 years ago
2
remove two stage travis test as seems to duplicate build
#96
jefferis
closed
3 years ago
0
Add flywire_adjacency_matrix
#95
jefferis
closed
3 years ago
0
add flywire_adjacency_matrix
#94
jefferis
closed
3 years ago
2
Feature/rootid speedups
#93
jefferis
closed
3 years ago
1
Add optional timestamp to islatest
#92
jefferis
closed
3 years ago
0
Feature/neuroglancer colour
#91
SiqiFang
closed
3 years ago
2
Return errors as warning with tryCatch
#90
alexanderbates
closed
3 years ago
0
Basic implementation of flywire_islatest
#89
jefferis
closed
3 years ago
0
Don't silently catch skeletor exceptions
#88
jefferis
closed
3 years ago
1
Feature/more 64bit ids
#87
jefferis
closed
3 years ago
0
flywire_ntplot could have two facets, one for axon and another for dendrite
#86
alexanderbates
opened
3 years ago
1
ensure flywire_partners gives same return value for method spine or sqlite
#85
jefferis
closed
3 years ago
1
batch flywire_rootid lookups for faster synaptic partner finding
#84
jefferis
opened
3 years ago
1
Make sure flywire_change_log passes on tz
#83
jefferis
closed
3 years ago
0
Feature/check for raw coords
#82
jefferis
closed
3 years ago
0
Installation issues: 'there is no package called memo'
#81
alexanderbates
closed
3 years ago
4
Feature/neuron synapses
#80
jefferis
closed
3 years ago
9
Cloudvol option
#79
alexanderbates
closed
3 years ago
1
more informative error for flywire_xyz2id when coordinate space might be wrong
#78
alexanderbates
closed
3 years ago
2
Feature/flywire partners both
#77
jefferis
closed
3 years ago
2
Vectorise flywire_xxx functions
#76
jefferis
closed
3 years ago
1
catch cases where neurons have no supervoxels (or synapses)
#75
jefferis
opened
3 years ago
1
an easy to use edgelist for flywire neurons
#74
alexanderbates
closed
1 year ago
4
Feature/local db path
#73
jefferis
closed
3 years ago
0
Add flywire synapses to flywire neurons
#72
alexanderbates
closed
3 years ago
3
Feature/cache flywire leaves
#71
jefferis
closed
3 years ago
0
Define seed points for (all) neurons within a region of interest
#70
jefferis
opened
3 years ago
1
flywire_leaves should respect as_character
#69
jefferis
closed
3 years ago
2
Bug when fetching data for multiple partners
#68
jefferis
closed
3 years ago
0
consider caching expensive flywire id lookups
#67
jefferis
opened
3 years ago
8
Make sure nt prediction functions can cope with multiple inputs
#66
jefferis
closed
3 years ago
0
nglayers should have a print method
#65
jefferis
opened
3 years ago
0
ngl_segments should prefer flywire segmentation_with_graph layers
#64
jefferis
closed
3 years ago
0
Feature/autosyn
#63
jefferis
closed
3 years ago
0
Add synaptic connectivity and neurotransmitter prediction
#62
jefferis
closed
3 years ago
1
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