ncsu-landscape-dynamics rpops issues

ncsu-landscape-dynamics / rpops

PoPS (Pest or Pathogen Spread) R Package

https://ncsu-landscape-dynamics.github.io/rpops/

GNU General Public License v3.0

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issues

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Pass multiple random seeds to pops-core

#202 petrasovaa closed 2 months ago
0
added na.rm =TRUE to any checks for raster data.

#201 ChrisJones687 closed 3 months ago
1
fix probablistic weather

#200 ChrisJones687 closed 3 months ago
1
Update checks.R

#199 John-Polo closed 3 months ago
0
Fix county level calibration

#198 ChrisJones687 closed 4 months ago
1
Updated pest_host_table_list to include susceptibility and mortality rate means and sd

#197 cyborginhas closed 4 months ago
2
Pull request to add in county level data for calibration and running the model

#196 ChrisJones687 closed 4 months ago
2
Created pest_host_table_list_creator helper function

#195 cyborginhas closed 4 months ago
2
Return dispers from multirun

#194 ChrisJones687 opened 5 months ago
0
Add uncertainty to pest host table

#193 ChrisJones687 closed 4 months ago
0
Update multiple seeds to work

#192 ChrisJones687 opened 5 months ago
0
Add a parameter to control cell infestability

#191 agimenezromero opened 5 months ago
1
Add an option for annual timestep

#190 agimenezromero opened 5 months ago
1
Decouple the establishment and reproduction/dispersal terms

#189 agimenezromero opened 6 months ago
1
Multi host2

#188 ChrisJones687 closed 5 months ago
0
Remove raster, rgdal, sp packages from dependencies

#187 petrasovaa closed 7 months ago
3
Use multihost API with single host

#186 petrasovaa closed 6 months ago
11
Add function for network file creation

#185 ChrisJones687 opened 8 months ago
0
Fix write seeds

#184 ChrisJones687 closed 9 months ago
2
written random_seeds file shouldn't have row names

#183 ChrisJones687 closed 9 months ago
0
simplify and fix creation of rasters within foreach loops

#182 ChrisJones687 closed 9 months ago
1
Polygon level calibration

#181 ChrisJones687 opened 9 months ago
1
Outputs for a single output_step have 2 layers should be 1

#180 ChrisJones687 closed 9 months ago
0
R seeds write

#179 ChrisJones687 closed 9 months ago
1
Add soils

#178 ChrisJones687 closed 9 months ago
2
Remove raster, sp, and rgdal from suggests and imports

#177 ChrisJones687 closed 5 months ago
1
Fix r cmd check on github actions windows.

#176 ChrisJones687 closed 9 months ago
0
write out random seeds csv for use later.

#175 ChrisJones687 closed 9 months ago
0
Write out all ensemble members option

#174 ChrisJones687 closed 9 months ago
0
Refactor

#173 ChrisJones687 closed 9 months ago
3
Add tests for new functionality

#172 ChrisJones687 closed 9 months ago
0
seperate seeds for random sections within r.

#171 ChrisJones687 opened 9 months ago
0
Refactor helpers and checks

#170 ChrisJones687 closed 9 months ago
0
Update soils to take soils from user

#169 ChrisJones687 closed 9 months ago
0
Update core

#168 ChrisJones687 closed 9 months ago
0
Add quarantine direction parameter from pops-core

#167 petrasovaa closed 9 months ago
0
update versions

#166 ChrisJones687 closed 11 months ago
1
update renv, r, and all packages

#165 ChrisJones687 closed 1 year ago
1
Treatment optimization

#164 petrasovaa opened 1 year ago
1
Add final_step as valid option in configuration checks

#163 petrasovaa closed 1 year ago
1
fix quarantine output in multirun

#162 petrasovaa closed 1 year ago
1
update mcc with checks

#161 ChrisJones687 closed 1 year ago
1
mcc calculation doesn't work with smal sample size

#160 ChrisJones687 closed 1 year ago
0
Update packages

#159 ChrisJones687 closed 1 year ago
1
only print used stats for calibration

#158 ChrisJones687 closed 9 months ago
0
Fixes 156

#157 ChrisJones687 closed 1 year ago
2
Return which file doesn't exist for errors

#156 ChrisJones687 closed 1 year ago
0
fixed errors when using 2 layer raster with uncertainty = TRUE

#155 ChrisJones687 closed 1 year ago
1
PoPS multrun fails when host and IC uncertainty are off but a 2 layer raster file is used

#154 ChrisJones687 closed 1 year ago
0
New cal metrics

#153 ChrisJones687 closed 1 year ago
1