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nextflow-io
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nextflow
A DSL for data-driven computational pipelines
http://nextflow.io
Apache License 2.0
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Store all .command* log files in log folder
#5047
trvietdung
opened
3 weeks ago
0
Can't modify metadata using values from `each`
#5046
olgabot
closed
3 weeks ago
2
Target java17
#5045
pditommaso
closed
2 weeks ago
5
Allow dynamic `cache` directives using closures
#5044
greenberga
opened
3 weeks ago
4
`join` with `remainder:true` emits even when the upstream process fails. Is this an expected behaviour?
#5043
GallVp
closed
3 weeks ago
2
task: update azure batch to 1.0.0-beta version
#5042
swampie
closed
2 weeks ago
5
null value in publishDir causes Nextflow to hang without error
#5041
amrei-bp
closed
1 week ago
1
Allow AWS Secrets to be used within IncludeConfig context
#5040
markpanganiban
opened
4 weeks ago
1
ERROR ~ BUG! exception in phase 'conversion' in source unit 'Script_773b20f0a9f08db0' unexpected NullPointerException
#5039
julibeg
closed
4 weeks ago
1
Dynamic label directive in a process definition
#5038
jgolob
opened
1 month ago
3
Retry Google 500 errors when writing task helper files
#5037
bentsherman
closed
2 weeks ago
1
Better timeline granularity
#5036
ewels
opened
1 month ago
0
Outdated Java Error Message in `24.04.2`
#5035
HarryHung
closed
1 month ago
1
ERROR ~ The AWS Access Key Id you provided does not exist in our records.
#5033
AsanchezMD
closed
1 month ago
0
Update docs on version matching
#5032
bentsherman
closed
1 month ago
1
Fix handling of tags with slash on Bitbucket
#5031
pditommaso
closed
1 month ago
1
Enable build with Java 21
#5030
pditommaso
closed
4 weeks ago
1
Enable build with Java 21
#5029
pditommaso
closed
4 weeks ago
6
Ability to pipe stdout -> stdin between processes
#5028
ewels
opened
1 month ago
15
Allow requester pays for S3 buckets
#5027
nathanthorpe
closed
2 weeks ago
1
AWS Batch: use custom log group name when requesting task logs, if it is defined
#5026
nathanthorpe
opened
1 month ago
1
Remove 64KB size limit on scripts
#5025
bentsherman
opened
1 month ago
1
Docs/wave singularity builds
#5024
marcodelapierre
closed
2 weeks ago
2
the Nextflow DAG should render as a subway plot
#5023
stevekm
opened
1 month ago
1
Request to enable dynamic `cache` directive
#5022
robsyme
opened
1 month ago
10
LocalSecretsProvider: escapes dollar char
#5021
marcodelapierre
closed
1 month ago
2
Fix the invocation of function with gstring
#5020
pditommaso
closed
1 month ago
4
Failed to publish files to S3 due to `java.nio.file.DirectoryNotEmptyException`
#5019
oliviapetrillo
opened
1 month ago
0
Charliecloud: registry, docs
#5018
nschan
closed
1 month ago
2
charliecloud registry, docs
#5017
nschan
closed
1 month ago
1
Postfixing `+` in `nextflow.version.matches()` is not working properly
#5016
HarryHung
closed
1 month ago
7
Wave build with singularity results in Docker build, not Singularity build
#5015
marcodelapierre
closed
1 month ago
2
Fix security vulnerabilities
#5014
bentsherman
closed
1 month ago
8
Fix the default for async finalizer
#5013
pditommaso
closed
1 month ago
4
Upgrade Nextflow to work with Java 22
#5012
bounlu
closed
1 month ago
1
Document `enabled` option in the output definition
#5011
bentsherman
closed
1 month ago
1
Can't open Console settings dialog
#5009
pditommaso
opened
1 month ago
0
Add enabled property to output DSL
#5008
pditommaso
closed
1 month ago
3
Extend latest version of nf-ga4gh plugin - most recently published appears to be from Dec. 19 2020
#5007
erasmussenilm
closed
2 weeks ago
13
Nested config parameters merge/overwrite each other
#5006
kverstae
opened
1 month ago
1
Bump Fusion 2.3
#5005
pditommaso
closed
1 month ago
1
Remove Fusion symlink resolution
#5004
bentsherman
closed
1 month ago
2
Remove `seqera` and `defaults` from Conda default channels
#5003
pditommaso
closed
1 month ago
2
Taskbar API is not supported on the current platform error when running console command
#5002
jfy133
closed
1 month ago
8
Upgrade libraries on 23.10.1
#5001
arnaualcazar
closed
2 weeks ago
10
Implement SIF ORAS protocol to HTTP
#5000
pditommaso
opened
1 month ago
10
Inspect command improvement for Singularity
#4999
pditommaso
opened
1 month ago
20
Default resources documentation
#4998
jansen-ista
closed
1 month ago
3
Issue Debuging pulling from a Private repo
#4997
ajulienla
opened
1 month ago
0
Improve stability of virtual threads at scale
#4995
bentsherman
opened
1 month ago
0
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