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nextflow-io
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nextflow
A DSL for data-driven computational pipelines
http://nextflow.io
Apache License 2.0
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Add retry options to Azure Blob client
#5098
pditommaso
opened
1 day ago
1
Allow configuration of additional Azure retry options for connection to blob storage in nf-azure
#5097
apetkau
opened
2 days ago
1
AWS: Switch from `containerProperties ` to `ecsProperties`
#5096
ewels
opened
2 days ago
1
`executor.retry.reason` is mislabeled in documentation
#5095
thalassemia
opened
3 days ago
0
Introspection on errorStrategy alters its expected effect.
#5094
muniheart
opened
3 days ago
0
hyperqueue (>=0.17.0) and Nextflow interpret memory resource differently
#5093
bguo068
opened
3 days ago
4
Using `array` fills my home with many files like "~/nf-PROC_NAME_(6294).o6823940.88"
#5092
lindenb
opened
4 days ago
4
"cleanup" option does not remove staged files from S3
#5091
stevekm
opened
4 days ago
3
Dynamic path for publish section
#5090
Puumanamana
opened
5 days ago
0
Enable multiple git revisions (Jun 2024) : final, using commit ID in repo localPath
#5089
marcodelapierre
opened
5 days ago
4
Mixing of function scope to two separate calls to same Groovy function from separate workflows
#5088
bskubi
opened
6 days ago
2
Enable multiple git revisions (Jan-Apr 2024) : temporary, using revision name in repo localPath
#5087
marcodelapierre
opened
1 week ago
1
The number of completed tasks from the final report does not match the number of actually started tasks in case of an error
#5086
cgoina
opened
1 week ago
0
Failed to publish: large file transfer to GCS
#5085
nick-youngblut
opened
1 week ago
1
Plugin did not take subcommand options
#5084
sfc-gh-hyu
opened
1 week ago
0
Fixed the issue to produce detailed error output.
#5083
deekshithpranav
opened
1 week ago
1
Issue-5073-errMsg-Fix
#5082
deekshithpranav
closed
1 week ago
1
Azure Fusion integration should not fail when managed identity auth is present
#5081
swampie
opened
1 week ago
1
Bump Fusion 2.4
#5080
pditommaso
closed
1 week ago
1
[Snyk] Security upgrade urllib3 from 2.0.7 to 2.2.2
#5079
arnaualcazar
closed
1 week ago
2
Error in nxf_kill
#5078
olivierlabayle
opened
1 week ago
0
New introspection `workflow.seqeraPlatform` scope for data from Seqera Platform
#5077
ewels
opened
1 week ago
4
[Nextflow + Azure Batch] Unable to find size for VM name 'Standard_E4ads_v5' and location 'germanywestcentral'
#5076
landroutsosAIE
opened
1 week ago
0
[Snyk] Security upgrade urllib3 from 2.0.7 to 2.2.2
#5075
arnaualcazar
closed
1 week ago
1
Nextflow creates object ending with slash during when using publishDir
#5074
adriannavarrobetrian
opened
1 week ago
3
"Missing project main script" error when there is a directory with the workflow name
#5073
lazappi
opened
1 week ago
3
Move Wave docs to Wave documentation
#5072
jason-seqera
opened
1 week ago
5
4446 ignore then fail strategy v3
#5071
pditommaso
closed
1 week ago
5
Fix executions hangs on finalisation exception
#5070
pditommaso
closed
2 weeks ago
1
Fix support for s5cmd 2.2.2
#5069
pditommaso
closed
2 weeks ago
1
Fix for issue #4757
#5068
tzuni
closed
2 weeks ago
2
[Azure Batch]: TimeoutException when Nextflow attempts to read files following task completion for large-scale analyses in Azure
#5067
apetkau
opened
2 weeks ago
8
Implement ignoreThenFail as pseudo error strategy
#5066
pditommaso
closed
1 week ago
1
Do not require tentantId when using Azure system-assigned managed identity
#5065
adamrtalbot
closed
2 weeks ago
4
Better tests for Azure Managed Identity
#5064
adamrtalbot
opened
2 weeks ago
0
Re-implement some changes that were dropped when #5042 was merged
#5063
adamrtalbot
closed
2 weeks ago
4
Add Managed Identity to Azure authentication documentation
#5062
adamrtalbot
closed
1 week ago
3
Fix the cleanup of local secret file
#5061
pditommaso
closed
1 week ago
8
Improve documentation for Azure Manage identities
#5060
pditommaso
closed
1 week ago
0
variable task.gpus like task.cpus.
#5059
alessiovignoli
opened
2 weeks ago
1
Generate stubs from process outputs
#5058
bentsherman
opened
2 weeks ago
0
Fix security vulnerabilities
#5057
bentsherman
closed
2 weeks ago
0
Remove GA4GH plugin
#5056
pditommaso
closed
2 weeks ago
7
timelime -> timeline
#5055
lindenb
closed
3 weeks ago
1
Surface AWS Batch time errors
#5054
ewels
opened
3 weeks ago
1
Fix unique operator hangs when applied to value
#5053
pditommaso
closed
3 weeks ago
1
Using the the unique operator after collect causes the pipeline to stall at pipeline end
#5052
R-Cardenas
closed
3 weeks ago
1
Add note that beforeScript runs inside the container for some execution environments
#5051
ewels
closed
2 weeks ago
1
Docs on running a subprocess in completion handler
#5050
nick-youngblut
opened
3 weeks ago
0
Docs sidebar: Black text for version changer.
#5049
ewels
closed
3 weeks ago
3
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