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nextflow-io
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nextflow
A DSL for data-driven computational pipelines
http://nextflow.io
Apache License 2.0
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Improve stability of virtual threads at scale
#4995
bentsherman
opened
1 month ago
0
singularity Unknown image format/type in nextflow pipeline
#4994
RosaDeSa
closed
1 month ago
0
Implements clusterOptions as a list
#4993
pditommaso
closed
1 month ago
1
Commit tag `[ci fast]` is not working anymore
#4992
pditommaso
opened
1 month ago
0
Fix console icon
#4991
pditommaso
closed
1 month ago
1
Undocumented behavior - Duplicated workflow parameters when using specific naming conventions
#4990
JaimeSeqLabs
opened
1 month ago
1
Fix console "Plugin manager not initialised" warn
#4989
pditommaso
closed
1 month ago
1
Fix groovy console issue
#4988
pditommaso
closed
1 month ago
2
The user-provided path .command.log does not exist.
#4986
angsm
closed
1 month ago
0
Add 'preview' to workflow runtime metadata
#4985
greenberga
closed
1 month ago
1
Fix job array docs
#4984
bentsherman
closed
1 month ago
1
Configuration file variable interpolation does not respect source order
#4983
mluypaert
opened
1 month ago
1
Sub-workflow is not inheriting replaced param values
#4982
nh13
opened
1 month ago
5
Fix missing include error message
#4981
bentsherman
closed
1 month ago
1
ERROR ~ Strings must not be null
#4980
AMCalejandro
closed
1 month ago
3
Support for ipcMode in AWS batch
#4979
nhammond
opened
1 month ago
4
nextflow hangs with misnamed channel
#4978
kpich
opened
1 month ago
1
`nextflow secrets` does not work with secrets that contain `$`
#4977
jdidion
closed
1 month ago
7
Update operator return types
#4976
bentsherman
closed
1 month ago
2
Add account config option for grid executors
#4975
pditommaso
closed
1 month ago
7
Improve error message for image pull time-out for Singularity/Apptainer/Charliecloud
#4974
marcodelapierre
closed
1 month ago
1
Job array refactor
#4973
pditommaso
closed
1 month ago
2
Fix Invalid DER: object is not integer when using EC private key
#4972
jagedn
closed
2 weeks ago
2
symlinks for staged files in directories are not removed in .command.run
#4971
nick-youngblut
opened
1 month ago
7
Enable the use of Java 22
#4970
pditommaso
closed
1 month ago
4
Update stale documentation in overview.md
#4968
greenberga
closed
1 month ago
2
Publishing a symlink when using fusion copies link (mock symlink) rather than link target
#4967
robsyme
closed
1 month ago
13
Cannot use splitCSV on HTTP files.
#4966
DriesSchaumont
closed
1 month ago
2
Fix collectFile saving to GCS with sort: false
#4965
bentsherman
closed
1 month ago
1
Allow multiple cluster options to be specified as a string list
#4964
bentsherman
closed
1 month ago
2
Nextflow Error: Unable to dump output of process 'null' -- Cause: java.nio.file.NoSuchFileException
#4962
wsstoregene
closed
2 months ago
0
Restore private methods visibility
#4961
pditommaso
closed
2 months ago
0
Order of 'includeConfig' and 'profiles' in nextflow.config seems to affect nested property overrides
#4960
danoreper
opened
2 months ago
5
Guarantees K8s pod name is unique on resume
#4959
pditommaso
closed
2 months ago
1
`filterMap` operator
#4958
Xophmeister
opened
2 months ago
3
Fix flaky docs test
#4957
bentsherman
closed
2 months ago
1
Google Batch: Not possible to point to external source code
#4956
VasLem
closed
2 months ago
6
chore: test ATEC-1898
#4955
peterwong-prenetics
closed
2 months ago
3
chore: test ATEC-1898
#4954
peterwong-prenetics
closed
2 months ago
1
ifEmpty operator doesn't return expected value (value channel)
#4953
onuryukselen
opened
2 months ago
5
Institution/Cluster level config
#4952
chris-cheshire
opened
2 months ago
2
Update aws.md to include Cluster access
#4951
Kartstig
closed
1 month ago
4
Improve config resolution docs
#4950
bentsherman
closed
2 months ago
1
Directory not found universc
#4948
HafsaKM
closed
2 months ago
0
Fix security vulnerability in logback
#4947
bentsherman
closed
2 months ago
1
Add Wave and Fusion info to workflow metadata
#4945
marcodelapierre
closed
1 month ago
8
Config-defined params using interpolated strings are stored as GStrings instead of Strings as of #4840
#4944
jmuhlich
closed
1 month ago
6
Ability to use 'name' attribute with path() output
#4943
stevekm
opened
2 months ago
2
nextflow run hello: ERROR ~ a fault occurred in an unsafe memory access operation
#4942
fbnrst
opened
2 months ago
4
[ci skip] docs: azure batch autopool feature more comprehensive documentation
#4941
adamrtalbot
closed
2 months ago
4
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