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nipy
/
mindboggle
Automated anatomical brain label/shape analysis software (+ website)
http://mindboggle.info
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Hyperlink DOIs to preferred resolver
#165
katrinleinweber
closed
5 years ago
0
enh: play nice with provenance
#164
mgxd
closed
5 years ago
0
Enh/antsupdate
#163
satra
closed
5 years ago
7
cannot execute binary file: Exec format error
#162
greedyscript
closed
5 years ago
2
fix: vtk tools build error
#161
satra
closed
5 years ago
0
mindboggle: command not found
#160
sunhuaiqiang
closed
5 years ago
4
fix: remove macos dir to pull the Docker image successfully via Singularity
#159
satra
closed
5 years ago
7
masking labels with thickness map; adjusting version
#158
satra
closed
5 years ago
0
Enh/combo
#157
satra
closed
5 years ago
1
Add joint fusion based labeling and new docker container
#156
satra
closed
5 years ago
3
[request] push latest image to dockerhub
#155
mgxd
closed
5 years ago
5
[WIP] fix: first pass at transition to vtk 8.x
#154
satra
closed
5 years ago
2
fix: update to new name for ANTS Cortical Thickness
#153
satra
closed
6 years ago
0
summary statistics of shape measures normalized by area?
#152
iamjoostjanssen
closed
6 years ago
2
Add ANTs LabelGeometryMeasures for volume stats per label
#151
binarybottle
closed
5 years ago
24
thickinthehead fails on large images ***plus discussion about ANTs thickness measures***
#150
binarybottle
closed
6 years ago
18
thickinthehead results incorrect for voxel dimensions other than 1mm^3
#149
binarybottle
closed
6 years ago
1
extract global measures in addition to shape-specific measures
#148
satra
opened
6 years ago
11
fix: import location
#147
satra
closed
6 years ago
0
enh: add routine to collate mindboggle output across participants
#146
satra
closed
6 years ago
3
mindboggle123 volume results change each time because of stochastic element in ANTs segmentation algorithm
#145
binarybottle
closed
6 years ago
3
Error running mindboggle on Windows 10
#144
cochrand
closed
6 years ago
11
Convert circleci to version 2
#143
binarybottle
closed
5 years ago
3
brief blueprint of concatenating data from mindboggle output
#142
satra
closed
6 years ago
3
Running Mindboggle on multiple subjects on a cluster
#141
binarybottle
closed
6 years ago
0
Error when processing Freesurfer Longitudinal stream results
#140
donghm
opened
6 years ago
5
Permissions issue: When I set host and dock I am unable to run mindboggle
#139
knutj
closed
6 years ago
4
Interpretation of Laplace-Beltrami spectrum results
#138
fuzhenrong
closed
6 years ago
8
Naming the input image for mindboggle
#137
fuzhenrong
closed
6 years ago
2
Trouble setting environment variables
#136
fuzhenrong
closed
6 years ago
5
The howto should be updated to also containing information about Ubuntu.
#135
knutj
closed
6 years ago
3
Importing the docker image into a singularity container
#134
mivanyo
closed
5 years ago
6
Mindboggle error during explode_scalars
#133
araikes
closed
5 years ago
4
enh: use less memory for ants
#132
satra
closed
6 years ago
1
ants Cortical thickness does not complete
#131
Heiditje
closed
6 years ago
2
How do I set the $IMAGE path? (originally "Mindboggle will not run on Mac")
#130
Heiditje
closed
6 years ago
5
Typical Workflow for Laplace-Baltrami Spectra/ Zernicke Moments mindboggle
#129
wuhanglian
closed
6 years ago
1
Update README.rst
#128
skrish13
closed
6 years ago
1
Update README.rst
#127
skrish13
closed
6 years ago
2
ANTs cortical thickness failed to run on example MRI dataset
#126
NickFausto
closed
6 years ago
17
enh: template directory + text crashfile
#125
mgxd
closed
6 years ago
0
Volume label differences between FS and ANTS (thoughts re: analysis?).
#124
jlhanson5
closed
6 years ago
2
Crash w/ "The behaviour of affine_transform with a one-dimensional "?
#123
jlhanson5
closed
6 years ago
4
Preemptive question re: ANTS custom template use?
#122
jlhanson5
closed
6 years ago
2
include recon-all's 3T flag
#121
PeerHerholz
closed
6 years ago
4
use ants from neurodebian to minimize ants footprint
#120
satra
closed
5 years ago
16
Mindboggle Docker image install space issue
#119
AkiNikolaidis
closed
7 years ago
4
fix: issue with version in main
#118
satra
closed
7 years ago
0
fix: make the scripts only execute when run
#117
satra
closed
7 years ago
0
nbpapaya not working in jupyter notebook tutorial
#116
binarybottle
closed
7 years ago
1
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