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oruebel
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ndx-icephys-meta
NWB extensions for origanizing intracellular electrophysiology metadata
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Track porting of the extension to NWB Core
#82
oruebel
opened
3 years ago
0
error on the README script when used with h5py>=3.1.0
#81
anilbey
closed
3 years ago
4
Minor fixes to run readme code using latest HDMF
#80
rly
closed
3 years ago
0
WIP: Refactor add_recording to reduce complexity
#79
rly
closed
3 years ago
0
WIP: Fix pynwb class inheritance
#78
rly
closed
3 years ago
0
Latest tests fail
#77
rly
closed
3 years ago
2
AttributeError: type object 'HierarchicalDynamicTableMixin' has no attribute '_get_fields'
#76
luiztauffer
closed
3 years ago
2
Storing data from multiple electrodes?
#75
rly
closed
3 years ago
1
Feature request: a key to map the nwbfile_in.stimulus to intracellular_recordings[n]["stimuli"]
#74
anilbey
closed
3 years ago
4
to_denonormalized_table not working as intended
#73
bendichter
closed
3 years ago
1
to_hierarchical_dataframe not working as intended
#72
bendichter
closed
3 years ago
1
Unnest nested spec type definitions
#71
rly
closed
4 years ago
3
Fix two broken tests
#70
rly
closed
4 years ago
0
Tests fail
#69
rly
closed
3 years ago
1
Make all tables AlignedDynamicTables
#68
oruebel
opened
4 years ago
0
Partial data still added to intracellular_recordings if add_intracellular_recording fails
#67
lvsltz
closed
4 years ago
0
Category tables require metadata even if stimulus/object is missing
#66
lvsltz
closed
3 years ago
1
Copy passed dicts before adding new items
#65
lvsltz
closed
4 years ago
0
Add/timereftype
#64
oruebel
closed
3 years ago
6
Prevent binding of stimuli, responses and electrodes metadata dictionaries to external variables
#63
lvsltz
closed
4 years ago
1
Add category to the add_column example
#62
lvsltz
closed
4 years ago
1
compression of new tables
#61
lvsltz
closed
4 years ago
5
Extract complex VectorData to its own type: TimeSeriesRef
#60
rly
closed
3 years ago
3
Remove nested type definition specifications
#59
rly
closed
4 years ago
1
Test and fix AlignedDynamicTable.to_dataframe
#58
oruebel
closed
4 years ago
0
Validation error in example file
#57
rly
opened
4 years ago
4
Profile read/write performance of the extension
#56
oruebel
opened
4 years ago
0
to_denormalized_dataframe() creates weird MultiIndex column ('i', 'd')
#55
lvsltz
closed
4 years ago
2
Support custom VectorIndex columns for conversion to hierar…chical dataframe
#54
oruebel
closed
4 years ago
0
to_hierarchical_dataframe() fails on tables that contain indexed columns
#53
lvsltz
closed
4 years ago
5
Add stimulus, response, and electrode subtables for IntracellularRecordings
#52
oruebel
closed
4 years ago
1
HierarchicalDynamicTableMixin.to_hierarchical_dataframe fails on empty hcol target table
#51
oruebel
closed
4 years ago
0
Added module for testing the HierarchicalDynamicTableMixin
#50
oruebel
closed
4 years ago
0
Update names of neurodata_types, assigned names, and corresponding code
#49
oruebel
closed
4 years ago
0
Add documentation for defining time slices in intracellular_recordings
#48
oruebel
closed
4 years ago
0
Add stimulus_type column to sweep_sequence table
#47
oruebel
closed
4 years ago
0
Replace use of ic_ prefix with icephys_ prefix
#46
oruebel
closed
4 years ago
0
Check and fix use of incompatible stimulus and response types
#45
oruebel
closed
4 years ago
0
Add NWBFile.get_ic_meta_parent_table
#44
oruebel
closed
4 years ago
0
Enable use of stimulus template
#43
oruebel
closed
4 years ago
0
Fix scalar dtypes in tests to avoid warnigns
#42
oruebel
closed
4 years ago
0
adding response with no corresponding stimulus
#41
bendichter
closed
4 years ago
2
import DT and DTR from pynwb instead of hdmf
#40
bendichter
closed
4 years ago
1
Suggestion: Add super simple example to README
#39
rly
closed
4 years ago
3
Example notebooks should use either current clamp or voltage clamp
#38
rly
closed
4 years ago
1
Add stimulus_type metadata table
#37
oruebel
opened
4 years ago
2
Avoid using `ic` as abbreviation for icephys
#36
t-b
closed
4 years ago
1
Add documentation for how to enter time slices using the add_intracellular_recording interface
#35
t-b
closed
4 years ago
0
API: add_intracellular_recording
#34
t-b
closed
4 years ago
2
Add stimulus_type column to sweep_sequence table
#33
oruebel
closed
4 years ago
0
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