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phbradley
/
conga
Clonotype Neighbor Graph Analysis
MIT License
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conga.plotting.make_graph_vs_graph_logos() do not have output
#21
xiachenrui
closed
2 years ago
1
assert exists(clones_file)
#20
afcmalone
closed
2 years ago
15
Sschattgen
#19
sschattgen
closed
3 years ago
0
TO DO: updates after the big refactor
#18
phbradley
closed
2 years ago
0
Question: Can Conga be run on SMART-seq data ?
#17
vincenthahaut
opened
3 years ago
9
add option to use a json file of args for run_conga
#16
sschattgen
closed
3 years ago
1
columns in `obs.tsv`: good_score_mask, tcr_clumping_pvalues, test
#15
markgene
closed
2 years ago
3
added 'strict_single_chain_match_adata_tcrs_to_db_tcrs'
#14
sschattgen
closed
3 years ago
0
Hotfix/save distfile
#13
markgene
closed
3 years ago
0
fix: make var names unique when read 10x h5.
#12
markgene
closed
3 years ago
0
add lit matching results to logo plots
#11
phbradley
closed
3 years ago
1
Issue with scanpy logging run_conga.py
#10
sschattgen
closed
3 years ago
1
updating readme
#9
jeremycfd
closed
3 years ago
0
change confusing variable names in preprocessing routines
#8
phbradley
closed
2 years ago
1
Fix dataset links in README
#7
phbradley
closed
2 years ago
2
Improved compatibility across OS and other edits
#6
sschattgen
closed
3 years ago
0
Sschattgen
#5
sschattgen
closed
3 years ago
0
added wrappers 'find_hotspots' and 'make_tcrdist_trees' .
#4
sschattgen
closed
3 years ago
0
Setup.py
#3
vincenthahaut
closed
3 years ago
5
Add files via upload
#2
sschattgen
closed
4 years ago
0
Update README.md
#1
matsen
closed
4 years ago
0
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