issues
search
phenopackets
/
phenopacket-tools
An app and library for building, conversion, and validation of GA4GH Phenopackets.
http://phenopackets.org/phenopacket-tools/stable/
GNU General Public License v3.0
10
stars
5
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Removing space from CURIE
#146
cmungall
closed
1 year ago
0
Many of the CURIEs in the examples have spaces in them, rendering them invalid
#145
cmungall
closed
1 year ago
0
Improve the tutorial and the user guide
#144
ielis
closed
1 year ago
0
Remove the concept of syntax and semantic validators.
#143
ielis
closed
1 year ago
0
duchenne.json does not conform to specification
#142
cmungall
closed
1 year ago
2
Setup Javadoc hosting
#141
ielis
closed
1 year ago
0
Improve documentation
#140
ielis
closed
1 year ago
0
Stabilize the documentation building workflow
#139
ielis
closed
1 year ago
1
Try using regexp for finding the release JAR.
#138
ielis
closed
1 year ago
0
Release 0.4.7
#137
ielis
closed
1 year ago
0
Improve UCUM resources
#136
ielis
closed
1 year ago
0
UCUM codes should be prefix encoded
#135
cmungall
closed
1 year ago
4
change miligram per day to milligram per liter (merge to `develop`)
#134
ielis
closed
1 year ago
0
Validate `Variation` object embedded in the the Phenopacket Schema
#133
ielis
closed
1 year ago
0
Revert "change miligram per day to milligram per liter"
#132
ielis
closed
1 year ago
0
use uniform UCUM encoding (either slash or dot notation but not both)
#131
cmungall
closed
1 year ago
0
change miligram per day to milligram per liter
#130
cmungall
closed
1 year ago
3
mg/dL duplicate
#129
cmungall
closed
1 year ago
1
VRS validation troubleshoot
#128
ielis
closed
1 year ago
0
Add organ system validator and validation examples
#127
ielis
closed
1 year ago
0
UCUM IRI prefix
#126
ielis
closed
1 year ago
2
Setup distribution process.
#125
ielis
closed
1 year ago
0
Remove Assays from constants
#124
pnrobinson
closed
1 year ago
1
Point out generated code in the source files.
#123
ielis
closed
1 year ago
0
Dedicated CLI package
#122
ielis
closed
1 year ago
0
Disease stage
#121
pnrobinson
closed
1 year ago
0
Check if the organ system is excluded at the beginning
#120
ielis
closed
1 year ago
0
Implement YAML I/O
#119
ielis
closed
1 year ago
0
Severity constant
#118
pnrobinson
closed
1 year ago
0
Implement organ systems validator
#117
ielis
closed
1 year ago
0
Fixing typo in isoISO8601onset method
#116
pnrobinson
closed
1 year ago
0
add vrs.json from ga4gh/vrs/commit/76542a9
#115
ahwagner
closed
1 year ago
4
Document --convert-variants
#114
lnrekerle
closed
1 year ago
1
correcting name of var and adding documentation for GeneDescriptor
#113
pnrobinson
closed
1 year ago
0
More constants
#112
pnrobinson
closed
1 year ago
0
Implement element sniffing
#111
ielis
closed
1 year ago
0
Separate code for phenopacket I/O and format sniffing
#110
ielis
closed
1 year ago
0
Build out Reponse constants
#109
pnrobinson
closed
1 year ago
1
Update constants
#108
ielis
closed
1 year ago
0
Adding HGNC Resource builder
#107
pnrobinson
closed
1 year ago
1
revising our examples
#106
pnrobinson
closed
1 year ago
0
Implement ancestry validation of HPO terms.
#105
ielis
closed
1 year ago
0
Adding Javadoc API url to README
#104
pnrobinson
closed
1 year ago
1
Update VRS and VERSATILE validation
#103
ielis
closed
1 year ago
2
Elaborate on the validation workflow
#102
ielis
closed
1 year ago
0
Let the user adjust the output verbosity at runtime
#101
ielis
closed
1 year ago
0
Release v0.4.6
#100
ielis
closed
1 year ago
0
Develop
#99
pnrobinson
closed
1 year ago
6
Update documentation
#98
hrshdhgd
closed
1 year ago
6
I have structured and complete something and there are still (or new)…
#97
pnrobinson
closed
1 year ago
0
Previous
Next