phylotastic datelife issues

phylotastic / datelife

R package containing datelife's core functionality

http://phylotastic.org/datelife/

13 stars 11 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Do all summaries require bladj?

#96 snacktavish opened 4 months ago
0
Run bladj from calibrations

#95 snacktavish opened 4 months ago
4
Error in phylo_median

#94 snacktavish opened 4 months ago
1
query fails due to unmatched names

#93 snacktavish opened 4 months ago
2
print method for chronogram database

#92 LunaSare opened 8 months ago
0
chronogram database update

#91 LunaSare closed 4 months ago
1
Documentations tweaks

#90 snacktavish closed 8 months ago
2
citation not getting rebuilt via pkgdown

#89 snacktavish opened 8 months ago
0
Reltime fix

#88 snacktavish closed 9 months ago
1
Ott names

#87 snacktavish closed 9 months ago
0
No species found in homo

#86 snacktavish opened 9 months ago
3
OTT name search failing

#85 snacktavish closed 4 months ago
1
fix various bugs

#84 LunaSare closed 1 year ago
0
add score to hard-coded Mus

#83 fmichonneau closed 1 year ago
4
fix bug

#82 LunaSare closed 1 year ago
0
Summarising chronograms fails

#81 irmoodie opened 1 year ago
2
elephas datelife query returning 7 species instead of 8

#80 LunaSare opened 1 year ago
0
managing subspecies when making a datelife query

#79 LunaSare opened 1 year ago
0
Database update

#78 LunaSare closed 2 years ago
0
Getting dated OpenTree induced synthetic subtree fails

#77 uyedaj opened 2 years ago
1
warning: lazy data db without compression

#76 LunaSare closed 8 months ago
1
Testing

#75 LunaSare closed 2 years ago
0
Adding Vignettes

#74 LunaSare closed 2 years ago
0
Relative time

#73 bomeara opened 2 years ago
1
Datelife plots

#72 LunaSare closed 2 years ago
0
tnrs_match batch function fix

#71 LunaSare opened 3 years ago
0
Issue with DESCRIPTION prevents installation

#70 vsbuffalo closed 1 year ago
1
catsanddogs_bold

#69 LunaSare opened 4 years ago
0
a solution for packages on imports that got kicked out of CRAN

#68 LunaSare opened 4 years ago
2
add some S3 methods

#67 LunaSare opened 5 years ago
0
tree from taxonomy reticulates and gives fatal memory error with ape::write.tree

#66 LunaSare opened 5 years ago
0
datelife testing data sets

#65 LunaSare opened 5 years ago
0
Get a TLS cert so people can connect via https

#64 bomeara opened 5 years ago
0
add dropped taxa to get_dated_otol_induced_subtree output

#63 LunaSare opened 5 years ago
0
summarize trees with hierarchical clustering method used for timetree

#62 LunaSare opened 5 years ago
0
allow tree grafting when n_overlap = 1

#61 LunaSare opened 5 years ago
0
standardize names below species level (eliminate var, subsp, etc.)

#60 LunaSare opened 5 years ago
0
Use common names

#59 bomeara opened 5 years ago
0
optimize get_datelife_result speed

#58 LunaSare opened 6 years ago
0
topology change induced by median scaling

#57 arlin closed 6 years ago
1
enable higher-taxon search on web page

#56 LunaSare closed 6 years ago
1
webpage need some improvements

#55 LunaSare closed 6 years ago
1
datelifeweb page seems to be using an old datelife version

#54 LunaSare opened 6 years ago
2
test that tree_fix_brlen with mrbayes works with large trees

#53 LunaSare opened 6 years ago
0
profile sdm

#52 LunaSare opened 6 years ago
0
what happens when we have no overlapping taxa in multiple chronograms?

#51 LunaSare opened 6 years ago
1
using hclust with mean linkage clustering

#50 LunaSare closed 6 years ago
1
in studies with several trees from the same group, identify the tree with median depth

#49 LunaSare opened 6 years ago
0
identify units in return value of scaling service

#48 arlin opened 6 years ago
0
Future-proof DOI reg-ex by broadening pattern

#47 katrinleinweber closed 6 years ago
4