poldracklab pydeface issues

poldracklab / pydeface

defacing utility for MRI images

MIT License

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issues

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pydeface usage

#57 ironb25 closed 6 months ago
2
Check if only FSL flirt is available

#56 mateuszpawlik closed 6 months ago
0
Add Zenodo snippet to improve citation

#55 effigies opened 10 months ago
5
FSL dependency check requires the complete FSL installation

#54 mateuszpawlik closed 6 months ago
2
FSL Not Found on Path for pydeface

#53 BWIEDOR closed 10 months ago
4
[feature proposal] BIDS directory as input

#52 neurorepro opened 1 year ago
18
inconsistent defacing results

#51 noah10 opened 1 year ago
1
How to save defaced output in a different directory (from input) when using --applyto argument.

#50 anandsaini024 opened 1 year ago
7
pydeface will choke on '(' in filename

#49 vincentkersten closed 1 year ago
2
Wrong registration with given mask and template

#48 JiaBob opened 1 year ago
2
How do I set the path?

#47 velpegor closed 1 year ago
2
nibabel.deprecator.ExpiredDeprecationError

#46 asadmalik85 closed 2 years ago
2
Issue using pydeface on linux VM

#45 frankgarcea closed 2 years ago
4
Detail the list of FSL dependencies

#44 mateuszpawlik closed 2 years ago
2
pydeface/pydeface/data/facemask.nii.gz is not a binary mask

#43 ericearl closed 2 years ago
1
Add missing runtime dependency on setuptools

#42 ylep closed 2 years ago
3
Improper defacing before reorient

#41 pstetz closed 10 months ago
3
doc: update versions after testing

#40 jstaph closed 1 year ago
1
How to cite you?

#39 shiranoren opened 3 years ago
2
docker image

#38 CarinaFo closed 3 years ago
2
[feature request] provide dicom directory as input

#37 greydongilmore opened 3 years ago
4
Mark images as defaced

#36 effigies opened 3 years ago
7
Not quite defaced

#35 soichih opened 4 years ago
5
Reduce time needed for defacing

#34 dlevitas closed 4 years ago
2
Versioning and pypi upload ?

#33 octomike closed 4 years ago
21
AttributeError: 'module' object has no attribute 'which'

#32 logophilus7 closed 10 months ago
4
Citation

#31 muschellij2 closed 4 years ago
1
Made a function based on this

#30 muschellij2 closed 4 years ago
0
Strange error message

#29 JamesWardAntony closed 4 years ago
3
shutil has no attribute 'which'

#28 pjkohler closed 5 years ago
1
defacing issue crop image

#27 alexfoias closed 4 years ago
17
Clone depth

#26 muschellij2 closed 4 years ago
10
Further Nipypification

#25 Shotgunosine opened 5 years ago
1
WIP nipypification of pydeface

#24 Shotgunosine closed 10 months ago
1
create build-or-deploy workflow

#23 Shotgunosine closed 5 years ago
1
Updates facemask.nii.gz with better ear and mouth mask

#22 miykael opened 6 years ago
18
Adds an additional headmask to data

#21 miykael closed 6 years ago
1
t2w scan defacing

#20 leej3 opened 6 years ago
11
extract defacing code to a function

#19 leej3 closed 5 years ago
15
incomplete defacing

#18 pbeukema closed 6 years ago
2
Make pydeface work with multivolume anatomicals

#17 Shotgunosine closed 6 years ago
3
remove singleton dim when creating outdata

#16 leej3 closed 6 years ago
1
Additional flags used to deface 7T data

#15 ofgulban closed 6 years ago
2
pep 8 & pep 257 style improvements and some cleanup

#14 ofgulban closed 6 years ago
1
Update readme

#13 ofgulban closed 6 years ago
1
Blur face

#12 effigies opened 6 years ago
0
Outputs to judge success? (aka face still included)

#11 jlhanson5 opened 6 years ago
6
motion correction before defacing?

#10 Conxz closed 4 years ago
1
orientation required to match MNI152

#9 jbwexler opened 7 years ago
0
Master

#8 jmtyszka closed 4 years ago
4