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r3fang
/
SnapTools
A module for working with snap files in Python
Apache License 2.0
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how to generate ArchR input files using snap file?
#41
taolincj
opened
2 years ago
0
Could not retrieve index file
#40
Nuwah12
closed
1 year ago
0
snaptools align-paired-end fail to open bam file
#39
mAGLAVE
opened
2 years ago
1
Custom genome name
#38
kgj1234
opened
3 years ago
2
Error creating a snap file from Cellranger's fragment bed.gz file
#37
pabloswfly
opened
3 years ago
1
MACS2 error
#36
mijhamilt
opened
3 years ago
0
tagged release
#35
EricDeveaud
opened
3 years ago
0
is GRCh38 reference compatible with “snaptools align-paired-end”?
#34
shhxiao19
opened
4 years ago
0
Bug in isBedQuerynameSorted()
#33
kridsadakorn
opened
4 years ago
0
The sdev of smat slot is NAN (DiffusionMaps)
#32
ChangliangWang
opened
4 years ago
0
Fix broken formatting: reformat everything with `black`
#31
mruffalo
opened
4 years ago
0
Remove generated files
#30
mruffalo
opened
4 years ago
0
Fix MACS2 call under Python 3
#29
mruffalo
opened
4 years ago
0
Trouble running runKNN()
#28
suminwei2772
opened
4 years ago
0
Error in runJaccard
#27
yqshao17
opened
4 years ago
0
Fix shebang
#26
hisplan
opened
4 years ago
0
Error running snap-add-pmat
#25
drbecavin
opened
4 years ago
1
Dump Read Slow
#24
suragnair
opened
4 years ago
0
Number of barcodes doesn't match with cellranger output.
#23
NKleinenkuhnen
opened
4 years ago
1
memory issue with creating snap-pre
#22
danielgchen
closed
4 years ago
3
memory issue with creating bam file with snaptools align paired reads
#21
danielgchen
opened
4 years ago
1
Release 1.4.8 on PyPi, v1.2.3 on GitHub
#20
Maarten-vd-Sande
closed
5 years ago
2
Possible issue with uint8 in bmat
#19
dawe
opened
5 years ago
3
Documentation for handling snap files
#18
dawe
opened
5 years ago
0
snap-add-pmat naming inconsistancy Warning
#17
yasserIRCM
closed
5 years ago
5
creating snap files from another processing pipeline
#16
dawe
opened
5 years ago
3
Error running snaptools snap-pre
#15
Austin-s-h
opened
5 years ago
3
Annotation of additional data to single barcodes/cells
#14
cschmidl
opened
5 years ago
1
Mouse and Human Mixed Data Experiment - Alignment Reference
#13
znavidi
opened
5 years ago
4
Barcode Sequencing Errors
#12
Austin-s-h
opened
5 years ago
2
Question about adding Genomes in snaptools snap-pre
#11
Austin-s-h
closed
5 years ago
2
Incorrect read counts for bin matrix?
#10
timoast
closed
5 years ago
1
add leiden functionality
#9
wayneidoyle
closed
5 years ago
0
Issue with installation
#8
smanne07
closed
5 years ago
3
Cyclic dependency for make bmat
#7
Zepeng-Mu
opened
5 years ago
3
Out of memory - snap object
#6
aalvarezf
opened
5 years ago
9
snap-add-gmat error
#5
plbngl
opened
5 years ago
6
Error in making snap object
#4
seishin0125
opened
5 years ago
6
add_bmat to snap file that already have bmat
#3
lhqing
closed
5 years ago
5
QC file mostly showing zeros.
#2
shawnzhangyx
opened
5 years ago
9
bam file to the snap format?
#1
shawnzhangyx
opened
5 years ago
1