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ropensci
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taxizedb
Tools for Working with Taxonomic SQL Databases
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Increase test coverage
#85
stitam
opened
1 month ago
0
New database - ICTV
#84
stitam
opened
1 month ago
0
Prepare COL locally
#83
stitam
closed
1 month ago
0
Prepare TPL locally
#82
stitam
closed
1 month ago
0
Prepare all SQLite databases locally
#81
stitam
closed
1 month ago
1
`worms`, `bold` dbs listed in `children` db but are unsupported (`run_with_db`)
#80
KaiAragaki
closed
1 month ago
2
tracking lineage on wikidata db
#79
mdrishti
closed
1 month ago
4
`taxize` and `taxizedb` return different `tibble` structures with `children` when `db = "itis"`
#78
KaiAragaki
opened
3 months ago
2
Prepare GBIF SQLite database locally
#77
stitam
closed
1 month ago
0
Repeat of #63
#76
KaiAragaki
closed
3 months ago
4
Children test failing (pt 2)
#75
KaiAragaki
closed
3 months ago
1
Could not resolve host: ftp.ncbi.nih.gov
#74
mkhemmani
closed
1 month ago
3
update ncbi endpoint
#73
KaiAragaki
closed
3 months ago
2
Allow the use of a custom datafiles in db_load_* functions
#72
arendsee
opened
6 months ago
1
change db and cache path
#71
bergalu
opened
9 months ago
4
missing species names for name2taxid
#70
hh1985
closed
9 months ago
4
404 error with db_download_gbif()
#69
pederengelstad
closed
11 months ago
3
How to unify the list generated after classification?
#68
lauraDRH
opened
1 year ago
8
Update README and CITATION
#67
stitam
closed
1 year ago
0
Update to standard R-check workflow
#66
stitam
closed
1 year ago
0
Final edits before releasing v0.3.1
#65
stitam
closed
1 year ago
0
How to get ta taxonomy table from taxizedb?
#64
GossypiumH
opened
1 year ago
2
GBIF database empty
#63
NgAMB
closed
1 year ago
3
Release taxizedb 0.3.1
#62
stitam
closed
3 months ago
1
remove email address for scott from DESCRIPTION
#61
sckott
closed
1 year ago
0
Restore readme.md
#60
stitam
closed
1 year ago
0
Can't download ITIS db
#59
juanmayorgahenao
closed
2 years ago
4
add option for curl override
#58
kylebuscaglia
closed
2 years ago
0
Query works with taxize but doesn't work with taxizedb
#57
stitam
opened
2 years ago
5
Transform ropensci.github.io in docs.ropensci.org
#56
Rekyt
closed
3 years ago
1
names2taxid issue with catalogue of life
#55
aguilart
opened
3 years ago
10
Possible bug: using 'downstream' function with World Flora Online
#54
kwymangrothem
closed
3 years ago
3
Downstream intermediates argument?
#53
sagesteppe
closed
3 years ago
3
Using taxize and taxizedb
#52
brunobrr
closed
3 years ago
15
Is there a `parents` function?
#51
Midnighter
closed
3 years ago
10
failing tests on cran
#50
sckott
closed
3 years ago
1
Add World Flora Online as a data source
#49
sckott
closed
3 years ago
0
fixes for ITIS downstream/classification/children
#48
sckott
closed
3 years ago
0
Data Source: World Flora Online
#47
aravind-j
closed
3 years ago
2
404 error when downloading COL
#46
chulmelowe
closed
4 years ago
2
children test failing
#45
sckott
opened
5 years ago
3
downstream possible bug
#44
sckott
closed
3 years ago
11
db_load_itis() fails after successful install with "psql not found on your computer"
#43
twest820
closed
4 years ago
10
fix bug in 'name2taxid' for organism names with underscores originally
#42
gpli
closed
6 years ago
7
"name2taxid" can't handle names with underscores correctly
#41
gpli
closed
6 years ago
4
Wikidata data source
#40
sckott
closed
6 years ago
0
EOL data source
#39
sckott
closed
3 years ago
14
change to mariadb in pkg, only affects COL right now
#38
sckott
closed
6 years ago
0
wikidata data source
#37
sckott
closed
6 years ago
1
move away from RMySQL
#36
Andreas-Bio
closed
6 years ago
4
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