saeyslab napari-sparrow issues

saeyslab / napari-sparrow

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Sc 64 allocation speed up

#203 ArneDefauw closed 1 week ago
0
SC_64 delayed query allocation

#202 ArneDefauw closed 2 weeks ago
0
SC_63 unstack via sparse coo matrix

#201 ArneDefauw closed 2 weeks ago
0
Error in creating conda environment with .yml

#200 HeesooSong closed 2 weeks ago
7
Allocate step fails with "ValueError: negative dimensions are not allowed" on large stereoseq dataset

#199 SilverViking closed 2 weeks ago
1
dpi parameter for plot functions

#198 lotte-vandevreken opened 1 month ago
0
Update README.md

#197 lopollar closed 1 month ago
0
Sc 62 add tutorial

#196 ArneDefauw closed 1 month ago
0
SC_62 add annotation algorithm sparrow

#195 ArneDefauw closed 1 month ago
0
SC_61 do not add empty polygons

#194 ArneDefauw closed 1 month ago
0
Sc 60 segment iou depth

#193 ArneDefauw closed 1 month ago
0
Sc 60 segment iou depth

#192 ArneDefauw closed 1 month ago
0
Sc 59 docs

#191 ArneDefauw closed 1 month ago
0
Sc 6 preprocess pixel clustering

#190 ArneDefauw closed 1 month ago
0
Datasets

#189 berombau closed 2 months ago
0
SC_58 fix voronoi not backed

#188 ArneDefauw closed 3 months ago
0
Geometries when expanding don't save properly

#187 lopollar closed 3 months ago
3
Sc 57 segment

#186 ArneDefauw closed 3 months ago
0
Bug in allocate_intensity, does segmentation

#185 berombau opened 4 months ago
3
labels to shapes function

#184 julienmortier opened 4 months ago
2
Problem to install sparrow mesmer env

#183 Lucas-Maciel closed 3 months ago
2
Cannot add shapes layer to sdata from numpy array

#182 julienmortier opened 4 months ago
3
SC_56 labels layer allocation + gitattributes

#181 ArneDefauw closed 4 months ago
0
Sc 55 linting

#180 ArneDefauw closed 4 months ago
0
View SpatialData object in napari-spatialdata

#179 ArneDefauw closed 4 months ago
2
Sc 54 view adata in napari spatialdata

#178 ArneDefauw closed 4 months ago
0
Sc 53 optimize memory

#177 ArneDefauw closed 4 months ago
0
Installation on windows

#176 lopollar opened 4 months ago
1
SC_53 small refactor clean up masks + bug fix regionprops

#175 ArneDefauw closed 5 months ago
0
AttributeError: module 'numpy' has no attribute 'float'.

#174 julienmortier closed 5 months ago
2
Sc 51 baysoe

#173 ArneDefauw closed 5 months ago
0
Sc 52 merge multiple masks

#172 ArneDefauw closed 5 months ago
0
KeyError: "'None' not found in sdata.images or sdata.labels"

#171 Lucas-Maciel closed 4 months ago
2
SC_50_fix_bug_segmentation

#170 ArneDefauw closed 6 months ago
0
Sc 48 watershed

#169 ArneDefauw closed 6 months ago
0
SC_47 support for custom model in cellpose

#168 ArneDefauw closed 6 months ago
0
Sc 46 rename sparrow

#167 ArneDefauw closed 6 months ago
0
Sc 46 rename sparrow

#166 ArneDefauw closed 6 months ago
0
SC_45_fix for long dask graph using many chunks in segmentation

#165 ArneDefauw closed 7 months ago
0
SC_44 irregular chunks apply

#164 ArneDefauw closed 7 months ago
0
SC_44 mesmer issue

#163 ArneDefauw closed 7 months ago
0
Sc 43 issue extend shapes

#162 ArneDefauw closed 7 months ago
0
SC_42 support pandas 2.0

#161 ArneDefauw closed 7 months ago
0
Sc 41 apply function

#160 ArneDefauw closed 7 months ago
0
Weird behaviour: size_min_max_filter

#159 KoenDesplenter closed 7 months ago
5
SC_40 plot shapes max projection - kwargs

#158 ArneDefauw closed 8 months ago
0
Filter genes allocation

#157 lopollar closed 8 months ago
0
Sc 39 3 d segmentation

#156 ArneDefauw closed 8 months ago
0
Sc 38 plot labels

#155 ArneDefauw closed 8 months ago
0
SC-37 fix version spatial-image

#154 ArneDefauw closed 8 months ago
0