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seandavi
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GEOquery
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
http://seandavi.github.io/GEOquery/
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Using GEOquery with private data
#154
TSI-PTG
opened
1 month ago
0
Issues with installing GEOquery package
#153
nilanjana1996
opened
1 month ago
0
Release GEOquery 3.0.0
#152
seandavi
opened
2 months ago
0
GSElimits not working
#151
ooverbee
opened
3 months ago
0
Update README.md
#150
yitaverse
closed
2 months ago
0
getGEO: Error in open.connection(x, "rb") : HTTP error 403.
#149
VasLem
closed
5 months ago
1
Bug Report: Encoding Parameter Issue and Error Handling in getGEO Function of GEOquery Package
#148
Guossin
opened
7 months ago
0
GEOquery not respecting timeout option
#147
seandavi
opened
11 months ago
1
add some new github actions
#146
seandavi
closed
1 year ago
0
fixes #144
#145
seandavi
closed
1 year ago
0
I ran into a bug when I downloaded the dataset GSE225759
#144
todaroroad
closed
1 year ago
0
GSE51373 Analysis
#143
lunakhayat
closed
1 year ago
0
issue in designing a dataset matrix
#142
MohaRamadan
closed
1 year ago
1
Function getGEO
#141
SammBS
closed
1 year ago
1
import methods in NAMESPACE
#140
MichaelChirico
closed
11 months ago
0
Make `timeout` configurable in `downloadFile()`
#139
yihui
closed
1 year ago
5
help with getGEO
#138
rominaappierdo
opened
1 year ago
0
Error while using getGEOSuppFiles on macbook Air
#137
AzlanNI
closed
2 years ago
1
implement searchGEO
#136
Yunuuuu
closed
2 years ago
0
Error when using `getGEO`
#135
iago-pssjd
opened
2 years ago
1
Correct `devtools` install and moving to `fs::path`
#134
dereckmezquita
closed
11 months ago
0
getGEO
#133
chenx9
opened
2 years ago
5
getGEOSuppFiles; uses already downloaded files instead of re-downloading
#132
dereckmezquita
closed
2 years ago
1
Move to `fs::path` rather than `file.path`
#131
dereckmezquita
opened
2 years ago
0
Create Dockerfile
#130
seandavi
closed
2 years ago
0
Create docker-publish.yml
#129
seandavi
closed
2 years ago
0
BiocCheck: adopt Authors@R
#128
seandavi
closed
2 years ago
0
BiocCheck ERROR: No 'VignetteEngine' specified in vignette or DESCRIPTION
#127
seandavi
closed
2 years ago
0
BiocCheck ERROR: Maintainer must register at the support site
#126
seandavi
closed
2 years ago
0
getGEO: Error in downloadFile(myurl, destfile, mode) :
#125
BolinZheng80
closed
2 years ago
1
GEOquery returning NAs as probe names
#124
garciaaxnih
closed
2 years ago
1
Convert to curl_download from download.file
#123
seandavi
closed
2 years ago
0
GEOquery
#122
Faezeh0
closed
2 years ago
1
Added R.utils to imports
#121
khughitt
closed
2 years ago
1
fix table parser when table is empty
#120
assaron
closed
2 years ago
0
File '/var/folders/_0/7mxf7f790995tf1k4gb52sj00000gn/T//Rtmp9RHdGd/GSE181063_series_matrix.txt.gz' does not exist or is non-readable. getwd()
#119
zkyriaki
closed
2 years ago
1
getGEO broken on Windows (?)
#118
pfgherardini
closed
2 years ago
4
Issues with getGEO() "Error in new(...), unused arguments
#117
suburbianmantia
closed
2 years ago
2
Error in data.table::fread(fname, sep = "") :
#116
zkyriaki
closed
2 years ago
1
Error in parseGSEMatrix(destfile, destdir = destdir, AnnotGPL = AnnotGPL, : parsing failed--expected only one '!series_data_table_begin'
#115
zkyriaki
closed
2 years ago
2
getGEO invalid row.names error
#114
sionaris
closed
3 years ago
10
Added check to detect/remove failed downloads
#113
khughitt
closed
3 years ago
1
Add check for incomplete GPL files
#112
khughitt
closed
3 years ago
2
Downloading gzipped soft files
#111
assaron
closed
3 years ago
0
parsing failed--expected only one '!series_data_table_begin'
#110
zh-zhang1984
closed
3 years ago
9
Parsing issue GSE99039
#109
ghost
closed
3 years ago
0
'value' length must equal sample number in AssayData
#108
ning-y
closed
3 years ago
6
An error is reported when using getGEO to download data.
#107
1298894527
closed
3 years ago
5
Loading Window yields issue on R online platform
#106
bastienchassagnol
closed
3 years ago
2
Problems Function Not Found
#105
DarioS
closed
3 years ago
2
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