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sneumann
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xcms
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
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upcoming change in rgl will break xcms
#656
sneumann
opened
1 year ago
3
Fix problem in fillChromPeaks with sparse data
#655
jorainer
closed
1 year ago
0
Change rgl.* to *3d
#654
dmurdoch
closed
1 year ago
1
Problem with fillChromPeaks
#653
felipe-mansoldo
closed
1 year ago
19
plotChromPeakDensity() - no peak
#652
linlennypinawa
opened
1 year ago
9
adjustRtime()
#651
linlennypinawa
opened
1 year ago
1
findChromPeaks() called on a `MChromatograms` object or a `XCMSnExp` object
#650
linlennypinawa
opened
1 year ago
4
Filter out one mz
#649
linlennypinawa
closed
1 year ago
3
How to overcome speed issues when running xcms in high-performance cluster?
#648
Pembs
opened
1 year ago
4
[WIP] Add new Ion-mobility peak picking algorithm
#647
RogerGinBer
opened
1 year ago
9
XCMS-centwave-exclusion-mz-list
#646
djawedb
opened
1 year ago
1
featureSpectra with Biocparallel
#645
13479776
opened
1 year ago
5
centWavePredIsoROIs for isotpesMatrix
#644
13479776
opened
1 year ago
0
Error in centWavePredIsoROIs
#643
13479776
opened
1 year ago
4
An attempt to include xcms in shiny server
#642
linlennypinawa
closed
1 year ago
2
findChromPeaks() and refineChromPeaks() is sending error
#641
Hani16
opened
1 year ago
3
Error in result[[njob]] <- value: attempt to select less than one element in OneIndex
#640
AharoniLab
opened
1 year ago
12
Plot retention time deviation in 'retcor' function
#639
JunYang2021
closed
1 year ago
2
Next Steps After Compounding (grouping)?
#638
ghost
closed
1 year ago
8
Build failure in two vignettes dims [product 50] do not match the length of object [10]
#637
sneumann
closed
1 year ago
2
chromatogram refine issues
#636
g0079
closed
1 year ago
4
Missing a few intensities information
#635
ykim7263
closed
1 year ago
2
How to reach to .. with XCMSnExp data?
#634
linlennypinawa
closed
1 year ago
4
"readMSData" unable to read uncorrupted mzML file
#633
MuyaoXi9271
opened
1 year ago
9
Preprocessing MS2 DDA data
#632
MuyaoXi9271
closed
1 year ago
2
What is the difference between ....?
#631
linlennypinawa
closed
1 year ago
4
LC-MS/MS single XCMSnExp objects containing the data of each isolation window
#630
hansenju
closed
1 year ago
3
Question about readMSData reading MSE data of Waters Q-TOF-MS
#629
fengmingchen
closed
1 year ago
5
Suggest for featureValues()
#628
WallFacerLR
opened
1 year ago
1
connection Error in Biocparallel for chromatogram function
#627
tobifuh
closed
1 month ago
24
adjustRtime error-Error in `colnames
#626
fengmingchen
closed
1 year ago
1
Processing multiple SWATH files and link features with resonstructed MS2 spectra
#625
Anne-CharlotteD
closed
1 year ago
2
Error: $ operator is invalid for atomic vectors
#624
arabidopsis
opened
2 years ago
1
this is a typo I think: `baseleve` :)
#623
arabidopsis
closed
2 years ago
1
how to change tick mark size of y axis on plotChromPeakImage()?
#622
ghost
opened
2 years ago
1
There is a missing
#621
lennyleadership
closed
2 years ago
1
[DOC] Replace links to MassSpecWavelet::sav.gol() with links to peakDetectionCWT()
#620
zeehio
closed
2 years ago
1
An error message
#619
ghost
closed
2 years ago
2
Is add=TRUE parameter still available for findChromPeaks?
#618
eterlova
closed
2 years ago
11
Wrong peak picking result using CentWave
#617
a1p6ca
opened
2 years ago
4
Error for CentWaveParam
#616
cyan20200410
closed
2 years ago
0
readMSdata generate scan error on Mac but not Windows
#615
IloveAphid
opened
2 years ago
8
feat: add parameter expandMz to featureChromatograms
#614
jorainer
closed
2 years ago
1
plotChromatogramsOverlay to allow stacking by file
#613
jorainer
opened
2 years ago
0
plot chromatograms - Stacking EICs
#612
CarlBrunius
closed
2 years ago
5
Getting MS1 spectrum for xcms features
#611
jorainer
opened
2 years ago
2
featureSpectra does not find MS2 spectra
#610
eterlova
closed
2 years ago
7
Is the ppm parameter in Centwave both sides or single side?
#609
amnahsiddiqa
closed
2 years ago
3
Analysing LC-MS files with different mass windows
#608
pablovgd
closed
2 years ago
7
XCMS set-up
#607
Onuh007
opened
2 years ago
8
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