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sneumann
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xcms
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
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Fix peak mz
#606
jorainer
closed
2 years ago
9
Re: questions about some data processing parameters
#605
JianFelixGuo
closed
2 years ago
2
Jomain
#604
jorainer
closed
2 years ago
4
Error: No MS level 2 spectra present
#603
13479776
opened
2 years ago
2
Running featureSpectra meets the issue from BiocParallel
#602
MuyaoXi9271
opened
2 years ago
6
Implement a as( XCMSnExp) for xcmsSet
#601
stanstrup
opened
2 years ago
2
Extract MS2 data by "featureSpectra" or "spectra"
#600
MuyaoXi9271
opened
2 years ago
3
Why the findChromPeaks function does not recognize smaller peak?
#599
Violet99999
opened
2 years ago
1
[Question] findChromPeaks input parameters.
#598
LaneMatthewJ
closed
2 years ago
5
[Question] findChromPeaks input parameters.
#597
LaneMatthewJ
closed
2 years ago
1
Perform peak detection with a defined roilist
#596
gmhhope
opened
2 years ago
4
Error in R_nc4_open: Too many open files and fail to load xcms package v 3.4.5
#595
lysoifer
opened
2 years ago
1
plot log2-transformed intensity in XIC
#594
gmhhope
opened
2 years ago
7
[question] How to interpret negative values from compareChromatograms()?
#593
Adafede
closed
1 year ago
1
[discrepancy] correlate() vs compareChromatograms()
#592
Adafede
closed
1 year ago
1
Detecting small peak between large peaks of same m/z
#591
breidan
closed
2 years ago
1
when more than one m/z is inside the ROI the m/z can be way off
#590
stanstrup
closed
2 years ago
17
how to run XCMS with multithreads
#589
YiqingElroy
opened
2 years ago
4
contact for IT department security review
#588
wmnolte
opened
2 years ago
3
groupChromPeaks error with more files but not with fewer
#587
eterlova
closed
2 years ago
12
Fix/remove mz data tests
#586
sneumann
closed
2 years ago
0
Jomain
#585
jorainer
closed
2 years ago
0
findChromPeaks issue (bug?)
#584
BaylorSci
opened
2 years ago
16
Disable testing on windows i386 and Disable parallel processing on Windows
#583
sneumann
closed
2 years ago
0
build error on BioC on Windows in testthat
#582
sneumann
closed
2 years ago
3
Small updates and unit test fix
#581
jorainer
closed
2 years ago
2
fillpeaks on data matrix
#580
ccshao
closed
2 years ago
4
Alignment of large dataset using XCMS
#579
tiwa1125
opened
2 years ago
1
subset retention time alignment
#578
gmhhope
opened
2 years ago
2
Re: the peak width parameters in XCMS
#577
oliverververver
opened
2 years ago
6
Error in profEIC
#576
yhshengjy
opened
2 years ago
1
combineSpectra questions
#575
cbroeckl
closed
2 years ago
13
Update plotQC.R
#574
sneumann
closed
2 years ago
0
fitgauss = TRUE results in NA with R4.10 and xcms_3.14.0
#573
pmbrophy
closed
2 years ago
3
Add LC-MS feature grouping functionality to xcms
#572
jorainer
closed
2 years ago
4
Export region of interest?
#571
gmhhope
opened
3 years ago
3
Obiwarp versus Peakgroups for rentention alignment
#570
gmhhope
closed
2 years ago
3
Error: negative extents to matrix
#569
a1p6ca
closed
2 years ago
4
Aligning MS1 only with MS/MS chromatograms results in negative adjusted retention times
#568
wmoldham
closed
3 years ago
3
EicSimilarityParam to group features based on similar EICs
#567
jorainer
opened
3 years ago
0
Add feature grouping functionality
#566
jorainer
opened
3 years ago
0
Fix build errors (issue #564)
#565
jorainer
closed
3 years ago
3
Build error and tons of "No data points ... Returning empty spectrum."
#564
sneumann
opened
3 years ago
2
SSgauss: update for R 4.1
#563
rickhelmus
closed
3 years ago
2
Re: a small issue with mzR or XCMS packge when sourcing code with foreach and doParallel
#562
oliverververver
opened
3 years ago
4
Implement the dynamic theory into the peak detection module
#561
xiaodfeng
opened
3 years ago
0
XCMS GCMS deconvolution script
#560
tatibren
opened
3 years ago
1
halfWindowSize errors
#559
cbroeckl
opened
3 years ago
2
Peaks are detected in background
#558
chrboku
opened
3 years ago
2
Request explanation on plot generated by plotChromPeakDensity
#557
gmhhope
closed
3 years ago
9
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