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stjude
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proteinpaint
Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.
https://proteinpaint.stjude.org/
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app drawer: update single cell card
#1831
xzhou82
opened
7 hours ago
0
filter test to cover support of bcf INFO fields
#1830
xzhou82
opened
7 hours ago
0
read login information in the index to load different intros
#1829
airenzp
opened
12 hours ago
0
Profile fixes
#1828
airenzp
closed
13 hours ago
0
Notify browser of dev events, including live-reload
#1827
siosonel
closed
14 hours ago
3
Fix for failing CI test
#1826
creilly8
closed
14 hours ago
0
improve oncomatrix non-ci test to include gene expression and survival, and CNV-only cohort
#1825
xzhou82
opened
17 hours ago
0
Scatter sample size read is not the area now, size x size is the area.
#1824
airenzp
closed
18 hours ago
0
issue with downloading geneVariant data
#1823
xzhou82
closed
13 hours ago
1
matrix: enable Edit option for geneVariant rows
#1822
congyu-lu
opened
1 day ago
1
use setTermBins to set term bins, and fix the summary plot error
#1821
congyu-lu
closed
1 day ago
0
for gdc age variable value, convert from days to decimal years
#1820
xzhou82
opened
1 day ago
0
Added choice to hide samples table in the singleCellPlot
#1819
airenzp
closed
1 day ago
0
Downloading geneExpression and metaboliteIntensity data is allowed in the download use case
#1818
airenzp
closed
1 day ago
0
oncomatrix non-ci test cover gene exp and survival terms
#1817
xzhou82
opened
1 day ago
0
matrix: enable `Edit` option for geneVariant rows
#1816
xzhou82
opened
1 day ago
0
In single cell plot displayed samples using a datalist
#1815
airenzp
closed
1 day ago
0
Fix client tsc
#1814
siosonel
closed
1 day ago
0
Move header from `app.js` and create publications button
#1813
creilly8
closed
1 day ago
0
geneVariant edit UI improvements and regression support
#1812
gavrielm
closed
1 day ago
2
Reset the host back to original server if host argument is set in run…
#1811
creilly8
closed
2 days ago
0
Gdc gsea2
#1810
robinpaul85
closed
2 days ago
0
Show citation for survivorship portal in dataset button.
#1809
creilly8
closed
2 days ago
3
Hier cluster missing term type
#1808
congyu-lu
closed
2 days ago
0
Support overall survival data from gdc
#1807
xzhou82
closed
1 day ago
1
mass app to apply environment-level debug flag at `app.opts.debug:boolean`
#1806
xzhou82
opened
3 days ago
0
gdc sc: clusters from multiple samples can be appended to DEgene dropdown
#1805
xzhou82
closed
16 hours ago
0
add survival term in gdc dictionary
#1804
xzhou82
closed
1 day ago
0
Centralize client-side filter rehydration
#1803
xzhou82
closed
3 days ago
0
Added button to open GSEA besides cluster selection
#1802
airenzp
closed
2 days ago
0
Migrate genesearch to typescript
#1801
creilly8
closed
6 days ago
0
Tentative implementation of gsea inside single-cell GDC app
#1800
robinpaul85
closed
2 days ago
0
termsetting: may centralize getDefaultBins() call
#1799
xzhou82
closed
16 hours ago
1
displayed DE table in the UI
#1798
airenzp
closed
1 week ago
2
Numeric violin brushing issue 2
#1797
karishma-gangwani
closed
1 week ago
0
hiercluster in matrix refactor not to pretend geneVariant term type
#1796
congyu-lu
closed
1 week ago
3
for a scrna experiment, pull its precomputed DE genes and display in app
#1795
xzhou82
closed
1 week ago
0
pull singlecell differentially expressed genes from gdc api
#1794
xzhou82
closed
1 week ago
0
feat: Support inputing custom CNV segments in mds3 tk, improve cnv re…
#1793
xzhou82
closed
1 week ago
0
Fixed click error
#1792
airenzp
closed
1 week ago
0
mds3: click on density axis errors out
#1791
xzhou82
closed
1 week ago
0
mds3: support custom cnv segments input and improve cnv rendering
#1790
xzhou82
closed
1 week ago
0
Defined gdc sc plots on dataset and allowed to hide plots from the UI
#1789
airenzp
closed
1 week ago
0
mds3: mayHydrateFilter() breaks by trying to alter frozen filter object
#1788
xzhou82
closed
3 days ago
0
Improve termsbyids route
#1787
karishma-gangwani
closed
1 week ago
2
Violin integration tests for gene expression terms.
#1786
creilly8
closed
1 week ago
0
Misc fixes in sampleView
#1785
airenzp
closed
1 week ago
0
More barchart integration tests for gene expression terms
#1784
creilly8
closed
1 week ago
0
Single sample will display plots in a two columns layout
#1783
airenzp
closed
1 week ago
0
fix the documentation auto-generation
#1782
siosonel
closed
1 week ago
0
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