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stjude
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proteinpaint
Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.
https://proteinpaint.stjude.org/
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Set scatter tab as visible for numeric terms
#1752
creilly8
closed
1 week ago
0
Removing `host: window.location.origin` from app drawer
#1751
creilly8
closed
1 week ago
0
optional callback on when gene search box is emptied
#1750
xzhou82
closed
1 week ago
0
Move jwt serverconfig handling bellow the bodyParser.json handling
#1749
aacic
closed
1 week ago
3
Backwards compatibility fix for old saved sessions missing .isOrdered…
#1748
creilly8
closed
1 week ago
4
Untrack public bin
#1747
siosonel
closed
1 week ago
0
Improved typing for `hicdata` and `hicgenome` routes
#1746
creilly8
closed
1 week ago
2
capitalize hierCluster color scheme label
#1745
congyu-lu
closed
1 week ago
0
violin CI: use gene expression as term2 with binning
#1744
xzhou82
closed
4 days ago
0
fix: A requesting top variably expressed genes, no longer limit to CG…
#1743
xzhou82
closed
1 week ago
6
test gdc gene exp api, no longer limiting to cgc genes for top variably expressed genes
#1742
xzhou82
opened
1 week ago
0
GSEA Implementation
#1741
robinpaul85
closed
1 week ago
2
query gene expression values from single cell and overlay on clustering map
#1740
xzhou82
closed
1 week ago
0
use Mds3 type to catch potential typescript errors early
#1739
siosonel
closed
2 weeks ago
0
fix: getFilterName() treats geneExp and metabolite same as float terms
#1738
xzhou82
closed
2 weeks ago
2
Hier cluster allow switch color scheme
#1737
congyu-lu
closed
2 weeks ago
6
start example how to improve typing detection in routes/termdb.config.ts
#1736
xzhou82
closed
2 weeks ago
1
Gsea new
#1735
robinpaul85
closed
2 weeks ago
0
fix: create minified msigdb and associate to hg38-test for CI
#1734
xzhou82
closed
2 weeks ago
2
add minified msigdb to termdbtest and include in ci
#1733
xzhou82
closed
2 weeks ago
0
Extract setHeaders method.
#1732
aacic
closed
2 weeks ago
1
Add blitzgsea lib to deps image
#1731
aacic
closed
2 weeks ago
0
hiercluster in matrix refactor not to pretend geneVariant term type
#1730
xzhou82
closed
2 days ago
1
fix hiercluster cell click error
#1729
congyu-lu
closed
2 weeks ago
0
mds3 getFilterName() lacks support for new term types
#1728
xzhou82
closed
2 weeks ago
0
fix: mds3 tk assigns vocabApi.app.opts.genome in adhoc manner for gen…
#1727
xzhou82
closed
2 weeks ago
0
Fixed bug in roundValueAuto
#1726
airenzp
closed
2 weeks ago
0
Fixed bug finding the digits to round
#1725
airenzp
closed
2 weeks ago
0
singleCell: support query and overlay gene-level exp value on clustering map
#1724
xzhou82
closed
2 weeks ago
0
do not call niceNumLabels() on integer term density/violin
#1723
creilly8
closed
2 weeks ago
3
removed parameters not needed when getting type values
#1722
airenzp
closed
2 weeks ago
0
mds3 tk filter lacks genomeObj
#1721
xzhou82
closed
2 weeks ago
1
matrix: hover/click menu over geneexp/metabolite rows should indicate term type, and do not show undefined for missing data
#1720
xzhou82
closed
1 week ago
0
fix: bug fix to pass terms[] when filtering by metaboliteIntensity
#1719
xzhou82
closed
2 weeks ago
0
in hiercluster heatmap, allow to switch color scheme (blue-black-yellow??)
#1718
xzhou82
closed
2 weeks ago
0
Sample view dzi
#1717
airenzp
closed
2 weeks ago
0
in violin/numeric tvs of an integer term, brushing range should not show decimals
#1716
xzhou82
closed
2 weeks ago
0
Data browser comments
#1715
creilly8
closed
2 weeks ago
0
matrix: for divideBy term, should assign proper default q for numeric terms e.g. mode=binary
#1714
xzhou82
closed
5 days ago
0
fix the generation of Function constructor argument
#1713
siosonel
closed
2 weeks ago
0
Delete the `mdsjsonform` code
#1712
creilly8
closed
2 weeks ago
0
fix: make the matrix react to divide-by term edits from the label click
#1711
siosonel
closed
2 weeks ago
0
DRAFT: Update commit
#1710
creilly8
closed
2 weeks ago
0
matrix: numeric divde-By term gives Unannotated on updating bins
#1709
xzhou82
closed
2 weeks ago
0
fix: client always set mode=continuous when querying violin route
#1708
xzhou82
closed
2 weeks ago
0
Fixed wrong mode in violin
#1707
airenzp
closed
2 weeks ago
1
fix: always hard set tw.q.mode to continuous before fetching violin data
#1706
xzhou82
closed
2 weeks ago
1
Update matrix survival
#1705
congyu-lu
closed
2 weeks ago
0
Implementing GSEA
#1704
robinpaul85
closed
2 weeks ago
0
No tape bundlng polyfill
#1703
siosonel
closed
3 weeks ago
0
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