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stjude
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proteinpaint
Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.
https://proteinpaint.stjude.org/
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Add blitzgsea lib to deps image
#1731
aacic
closed
2 weeks ago
0
hiercluster in matrix refactor not to pretend geneVariant term type
#1730
xzhou82
closed
1 week ago
1
fix hiercluster cell click error
#1729
congyu-lu
closed
3 weeks ago
0
mds3 getFilterName() lacks support for new term types
#1728
xzhou82
closed
2 weeks ago
0
fix: mds3 tk assigns vocabApi.app.opts.genome in adhoc manner for gen…
#1727
xzhou82
closed
3 weeks ago
0
Fixed bug in roundValueAuto
#1726
airenzp
closed
3 weeks ago
0
Fixed bug finding the digits to round
#1725
airenzp
closed
3 weeks ago
0
singleCell: support query and overlay gene-level exp value on clustering map
#1724
xzhou82
closed
3 weeks ago
0
do not call niceNumLabels() on integer term density/violin
#1723
creilly8
closed
3 weeks ago
3
removed parameters not needed when getting type values
#1722
airenzp
closed
3 weeks ago
0
mds3 tk filter lacks genomeObj
#1721
xzhou82
closed
3 weeks ago
1
matrix: hover/click menu over geneexp/metabolite rows should indicate term type, and do not show undefined for missing data
#1720
xzhou82
closed
1 week ago
0
fix: bug fix to pass terms[] when filtering by metaboliteIntensity
#1719
xzhou82
closed
3 weeks ago
0
in hiercluster heatmap, allow to switch color scheme (blue-black-yellow??)
#1718
xzhou82
closed
2 weeks ago
0
Sample view dzi
#1717
airenzp
closed
3 weeks ago
0
in violin/numeric tvs of an integer term, brushing range should not show decimals
#1716
xzhou82
closed
3 weeks ago
0
Data browser comments
#1715
creilly8
closed
3 weeks ago
0
matrix: for divideBy term, should assign proper default q for numeric terms e.g. mode=binary
#1714
xzhou82
closed
1 week ago
0
fix the generation of Function constructor argument
#1713
siosonel
closed
3 weeks ago
0
Delete the `mdsjsonform` code
#1712
creilly8
closed
3 weeks ago
0
fix: make the matrix react to divide-by term edits from the label click
#1711
siosonel
closed
3 weeks ago
0
DRAFT: Update commit
#1710
creilly8
closed
3 weeks ago
0
matrix: numeric divde-By term gives Unannotated on updating bins
#1709
xzhou82
closed
3 weeks ago
0
fix: client always set mode=continuous when querying violin route
#1708
xzhou82
closed
3 weeks ago
0
Fixed wrong mode in violin
#1707
airenzp
closed
3 weeks ago
1
fix: always hard set tw.q.mode to continuous before fetching violin data
#1706
xzhou82
closed
3 weeks ago
1
Update matrix survival
#1705
congyu-lu
closed
3 weeks ago
0
Implementing GSEA
#1704
robinpaul85
closed
2 weeks ago
0
No tape bundlng polyfill
#1703
siosonel
closed
3 weeks ago
0
replaced patients with samples in another place
#1702
airenzp
closed
3 weeks ago
0
optimize to require tape bundling only in certain contexts
#1701
siosonel
closed
3 weeks ago
0
numeric termsetting: delete q.last_bin{} when setting auto for last bin
#1700
xzhou82
closed
3 weeks ago
0
replaced patients with samples
#1699
airenzp
closed
3 weeks ago
0
numeric termsetting bug when switching modes
#1698
xzhou82
closed
3 weeks ago
0
fix: add missing jsonwebtoken import
#1697
aacic
closed
3 weeks ago
0
fix: test run on all genome tabix files on server launch to detect ol…
#1696
xzhou82
closed
3 weeks ago
0
Allow to query for tw.id in interaction terms
#1695
gavrielm
closed
3 weeks ago
0
fix: bug fix to only apply niceNumLabels() when numeric tvs is not un…
#1694
xzhou82
closed
3 weeks ago
0
niceNumLabels error when using regression interface
#1693
gavrielm
closed
3 weeks ago
1
Fix setHostUrl function.
#1692
aacic
closed
3 weeks ago
0
sampleScatter: Displaying search info and samples filtered out
#1691
airenzp
closed
3 weeks ago
0
Remove plotBrainImaging from serverconfig.json.
#1690
aacic
closed
3 weeks ago
0
Format tvs pill number labels
#1689
creilly8
closed
3 weeks ago
0
Format tvs pill labels into nice number format
#1688
creilly8
closed
3 weeks ago
0
Handle jwt in serverconfig
#1687
aacic
closed
3 weeks ago
0
Fixed violin bugs related to brush and rounding
#1686
airenzp
closed
3 weeks ago
1
Image plot
#1685
airenzp
closed
3 weeks ago
0
Brush on age violins not returning correct values
#1684
creilly8
closed
3 weeks ago
0
mds3: Fix for long labels in subtracks; clean up import statements
#1683
creilly8
closed
4 weeks ago
0
Fix for path error appearing for hic genome files from url
#1682
creilly8
closed
4 weeks ago
0
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