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superphy
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spfy
Spfy: an integrated graph database for real-time prediction of Escherichia coli phenotypes and downstream comparative analyses
https://lfz.corefacility.ca/superphy/grouch/
Apache License 2.0
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IndexErrormodules.phylotyper.phylotyper in beautify
#276
kevinkle
closed
6 years ago
3
Production 6.1.0
#275
kevinkle
closed
6 years ago
0
MERGE: 6.2.0 Integrated Pipelines
#274
kevinkle
closed
6 years ago
4
EDIT: accept a number of pycharms suggestions
#273
kevinkle
closed
6 years ago
0
MERGE: clearer distinction between `middleware` and `modules`
#272
kevinkle
closed
6 years ago
0
update ectyper
#271
kevinkle
closed
6 years ago
19
UPDATE: reactapp to 6.1.1
#270
kevinkle
closed
6 years ago
0
Issue with https://lfz.corefacility.ca/superphy/spfy/results?token=a24d4621517ad79475fe27a445ba3acf7a14497c
#269
kevinkle
closed
6 years ago
3
MERGE: changes in 6.1.0
#268
kevinkle
closed
6 years ago
0
MERGE: 6.1.0 bearer accounts
#267
kevinkle
closed
6 years ago
0
MERGE: new ontology generation
#266
kevinkle
closed
6 years ago
0
DEL: tons of old unused code
#265
kevinkle
closed
6 years ago
0
UPDATE: corefacility was on 15e58e55fbe90527775b04ab0b893450b799e229, now merge in master
#264
kevinkle
closed
6 years ago
0
MERGE: added support for user accounts
#263
kevinkle
closed
6 years ago
1
MERGE: bring 259 up to date with tests from master
#262
kevinkle
closed
6 years ago
0
136 docker webserver
#261
kevinkle
closed
6 years ago
0
244 moartests
#260
kevinkle
closed
6 years ago
0
Use /bigdata/dataloader
#259
kevinkle
closed
6 years ago
2
could not create blastdb
#258
kevinkle
opened
6 years ago
0
MERGE: update dev. branch with changes from master
#257
kevinkle
closed
7 years ago
0
FIX: change turtle_graph to upload via queue as well
#256
kevinkle
closed
7 years ago
0
FIX: change turtle_graph to upload via queue as well
#255
kevinkle
closed
7 years ago
0
MERGE: update the sideload.py script
#254
kevinkle
closed
7 years ago
0
MERGE: update production with changes from master
#253
kevinkle
closed
7 years ago
0
MERGE: blazegraph uploads use their own queue
#252
kevinkle
closed
7 years ago
0
MERGE: better support for metadata upload
#251
kevinkle
closed
7 years ago
0
FIX: submodule fixes not in 240
#250
kevinkle
closed
7 years ago
0
Job fingerprinting
#249
kevinkle
opened
7 years ago
2
MERGE: updated the sideload script to support phylotyper
#248
kevinkle
closed
7 years ago
2
Blazegraph upload tasks should be added to it's own queue
#247
kevinkle
closed
7 years ago
3
Consider using the blazegraph-python lib instead of requests
#246
kevinkle
closed
7 years ago
1
MERGE: all current tests are passing now
#245
kevinkle
closed
7 years ago
0
new test suite
#244
kevinkle
closed
6 years ago
7
blazegraph posts hitting timeouts at corefacility
#243
kevinkle
closed
7 years ago
2
DEL: rm angularjs
#242
kevinkle
closed
7 years ago
0
better way to handle option parsing in post routes
#241
kevinkle
opened
7 years ago
0
update sideload.py to process enterobase set on corefacility
#240
kevinkle
closed
6 years ago
9
rm old angularjs website
#239
kevinkle
closed
7 years ago
1
MERGE: add tests from attempt to fix header parsing
#238
kevinkle
closed
7 years ago
0
MERGE: v5.0.0 Panseq + Phylotyper Integration
#237
kevinkle
closed
7 years ago
0
MERGE: master into phylo-production
#236
kevinkle
closed
7 years ago
0
UPDATE: bring master into rc-4.4.0
#235
kevinkle
closed
7 years ago
0
deployment of v5.0.0
#234
kevinkle
closed
7 years ago
5
separate blazegraph uploads from frontend returns
#233
kevinkle
opened
7 years ago
1
4.3.3 production
#232
kevinkle
closed
7 years ago
0
FIX: Issue #230 phylotyper.beautify
#231
kevinkle
closed
7 years ago
0
phylotyper.beautify is returning part of the timestamp in the filename
#230
kevinkle
closed
7 years ago
1
MERGE: phylotyper uploads ref vfs on first run
#229
kevinkle
closed
7 years ago
0
remove phylotyper's dep on ectyper
#228
kevinkle
closed
6 years ago
4
docker composition should load all VFs during install
#227
kevinkle
closed
7 years ago
5
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