teamtomo membrain-seg issues

teamtomo / membrain-seg

membrane segmentation in 3D for cryo-ET

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issues

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Update docs

#75 LorenzLamm closed 11 hours ago
0
Update docs

#74 LorenzLamm closed 11 hours ago
0
Update cli.py example segment command

#73 GenevieveBuckley closed 12 hours ago
2
fix numpy < 2.0.0

#72 LorenzLamm closed 2 days ago
3
"Why does an assignment issue occur after the installation is complete?"

#71 xingxingjiukunkun closed 2 days ago
2
Error on membrain launch after following installation guide

#70 GenevieveBuckley closed 11 hours ago
6
Modify finetune function

#69 Hanyi11 opened 3 weeks ago
0
Add finetune function

#68 Hanyi11 opened 1 month ago
1
Accelerating inference performance with torch.compile

#67 saugatkandel opened 1 month ago
0
ci(dependabot): bump peaceiris/actions-gh-pages from 3 to 4

#66 dependabot[bot] opened 2 months ago
0
add skeletonization code

#65 Hanyi11 closed 2 months ago
2
On the fly rescaling (GPU)

#64 LorenzLamm closed 1 month ago
3
ci(dependabot): bump softprops/action-gh-release from 1 to 2

#63 dependabot[bot] opened 3 months ago
0
nan in the training loss

#62 Hanyi11 opened 3 months ago
0
add link to readme file

#61 LorenzLamm closed 3 months ago
0
installation instructions outdated in docs

#60 alisterburt opened 4 months ago
0
fix docs deployment and get rid of warning during docs build

#59 alisterburt closed 4 months ago
0
moving to package independent of membrain

#58 alisterburt opened 4 months ago
10
docs setup with mkdocs-material

#57 alisterburt closed 4 months ago
6
simple python API

#56 alisterburt opened 4 months ago
1
on-the-fly preprocessing

#55 alisterburt opened 4 months ago
13
Opening up the training data

#54 alisterburt opened 4 months ago
2
usage in multi-user environments -> automated weights download

#53 alisterburt opened 4 months ago
20
ci(dependabot): bump codecov/codecov-action from 3 to 4

#52 dependabot[bot] closed 4 months ago
0
ci(dependabot): bump styfle/cancel-workflow-action from 0.12.0 to 0.12.1

#51 dependabot[bot] closed 4 months ago
1
ci(dependabot): bump actions/setup-python from 4 to 5

#50 dependabot[bot] closed 4 months ago
1
Out of memory killed problem in Ubuntu

#49 forxhunter opened 5 months ago
0
Add twine config to release action in ci.yml

#48 LorenzLamm closed 5 months ago
0
remove 3.12 from test matrix

#47 LorenzLamm closed 5 months ago
0
update CI for deployment

#46 LorenzLamm closed 5 months ago
0
Surface dice loss

#45 LorenzLamm closed 5 months ago
2
Potential bug in `masked_accuracy`.

#44 DuskNgai closed 5 months ago
2
Fixed output filename formatting which assumed the extension was always 3 characters long

#43 rdrighetto closed 6 months ago
2
Add default arguments to components and threshold functions

#42 LorenzLamm closed 8 months ago
1
Fix lightning issue

#41 LorenzLamm closed 8 months ago
7
TypeError

#40 jkh1 closed 7 months ago
7
ci(dependabot): bump styfle/cancel-workflow-action from 0.11.0 to 0.12.0

#39 dependabot[bot] closed 5 months ago
1
Help display shows unavailable "predict" command

#38 m-albert closed 8 months ago
3
Ported deconvolution code to CuPy

#37 rdrighetto closed 5 months ago
3
Misc features

#36 LorenzLamm closed 8 months ago
0
documentation typos

#35 3P1L closed 8 months ago
1
ci(dependabot): bump actions/checkout from 3 to 4

#34 dependabot[bot] closed 5 months ago
1
Training from scratch: 3D Coordinates

#33 virlyananda closed 9 months ago
2
Deconvolution as a preprocessing option

#32 rdrighetto closed 10 months ago
4
Header issues

#31 LorenzLamm closed 10 months ago
0
Feature Suggestion: Add CLI flag to turn off test_time_augmentation

#30 MSiggel closed 8 months ago
2
Adjust compatibility for ColabSeg

#29 LorenzLamm closed 11 months ago
0
Fix dataloading issues

#28 LorenzLamm closed 11 months ago
0
Error during normalization while running membrain on WSL2

#27 BhattaArjun2p closed 11 months ago
7
Feature suggestion: skeletonization of output segmentation

#26 LorenzLamm opened 11 months ago
3